Gene Rmar_0704 details

Gene Information

• Locus tag: Rmar_0704
• ID: 8567341
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: +
• Start bp: 812694
• End bp: 817811
• Gene Length: 5118 bp
• Protein Length: 1705 aa
• Translation table: 11
• GC content: 68%
• Product: protein of unknown function DUF490
• Protein accession: YP_003289990
• Protein GI: 268316271

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACCCA CCCCGTCCAT AACGCCTGCA CGTCGGTGGC TGCGCCGCAT CGGATGGGCG 
CTGCTGGGGC TGATCGGCAC GCCGATCGTG CTGGTCGGGC TGCTTCTGCT GGTGCTGCAG 
ACCTCGTGGG GCGCCGAGCA GGTGCGTCGG CTGATCGAAC GTCAGGTGAA CGCGCAGCTT 
CAGGGTGGAC GGCTGGAGAT CGGGGCGCTG CGGGGTAACT TCGTGCGCAC GCTGGCACTC 
TACGATCTCG CCTTGCGCGA CACGTCCGGG CGCGCGCTGC TGGCGCTGGA TTCGCTCGAA 
ATAGCCTACG TGCCCGAGGC GTTGCTTTTC GACCGGCGTG TACACCTGCG GCGGGTGCGC 
CTGATCCGTC CGCGCCTGGA GCTGACGCAG CAACCCGACA GCACCTGGGA CCTGCTGCGT 
CTGTTCGGCA CGGCACCCGA CACGACTGCA AAGGAAACGG AGGCCGGTGT CGCCCAGGAC 
GTCTGGATCG ACCACCTGGC GCTGCGCGAC GGGACGGCGG CGCTGCACTT CTACACGCCC 
CGCGCCGACT CGACCTGGCA TCTGCACCGG CTCGACGTGC AGCTCGATAC GCTGCGATTG 
CCACCGGAAG GCTGGCCCGC GTTCTCGGTG CGCACGCTGG AAGCGGTGCT GCAGCCGCCC 
GGCGCTCCCG ACTCGGTGCA CGTCCTCACC CGACTGGCGC TGCGCGAGCG GCATTTCCGA 
CTCGACACGC TGCACATATG GTCCGCCCGC AGCCGGGTGA CCGGTGGCGG GACGCTGATG 
CTCCCGGCCG ATACGGGACA GATCGAAGCC GTGCAGTTCC GGCTGGAGGC GCAGCCGCTG 
GCCCTCTACG ACCTGACGCC GTTCGTGGCG GTCCCGGATC CCGGTCGGAC GCTCGCGGGC 
TTCGTGACCG TGCAGGGCAG CGGCCGTCTG CTGCAGGCGC AGGCCGAGCT GCGTACCGGC 
ACGGGTGGCG AACTGGCACT ATCGGCCACG TTCACGCCGT TGCTGGACGA TTCGGTGCGC 
TACCGGGCCG ACGTGCAGGT GCGACGGCTG GACCCGGCTT TCTTCGGCGG ACCGGCGGGC 
CGCCTCGATC TGCAGCTCCG GGCCGACCTG CAGGGACCGT CGCTGGAGGC GCTGGACGGC 
GAGGCCAGGC TCGACGTGTC GGAGGCGCGA CTGGGCGCCT ACCGACTGGA TTCCACCCGG 
CTTCAGGTGC GCTTCGTGGA GGGCGAAGGC CGATTGACAG CACAGACCGG TCTGCGCGGC 
GCCCGGCTGC AACTGGACGG CCGGGGGTGT CCGTTCGACC CGACGCCCAC CTATCGCCTG 
GATGGTGTGC TGCAGAACCT GAACCCGGCC CGTTTCCTGG CCGACACAAG CTGGACGGGA 
CAGCTGAACC TGGCCTTTCA ACTGGAGGGC GAGGGGGCGA CGCGGCTGGA CGGGCGGCTC 
ATGCTGCAGC CTTCTCGGTT GAACCGGGCG GCGATCGACA GCGGGCAGCT GGCCGTACAC 
CGGCGGGGCG ACACGCTCCG CTTTGCGCTG GAGGCGACGC TGGCCGGTGG CCGCCTGCAG 
GGACGCGGGC GATTGGCCGG CGCCTCGACG CCTTCCTACG AGGTGGAGCC CTTCGTGCTG 
GAGCGAATCG ACGTGGCGGC CCTGCTGGGC GATACGCTGC ACAGCGCGGT CAGCGGCCGA 
CTCCGGCTGC GCGGGAGCGG GACGGCGCCC GAGGCGCTTC GCCTGGAGGC CACGCTCGAC 
CTGGACAGTC TGGTCTATGG CACCTACCGA CTGGCGCCCG TGCGCGTGCC CGTCCGGATG 
GATCGCGGAT TGCTAACAGC CACGCCTGAA ATCGGGCTGG ACGAGGGCCA TGTGGCTTTC 
CGCTTACAGG GACGGCCGAT GGCCCGAAGG CCCCGCTGGC AGATCGACCG CGGCCGCCTG 
GAGCGGGTGA ACCTGGCCGC CGTGATACCG GACTGGTCTT CGGTGCTGAA CGGCTCGTTC 
GAAGGATTCT ACCGGGGGGC GACGTTGGCC GATGCGGAGG GCGAACTGAC GCTCCTGCTG 
GAGGACTCCC GGCTCAATGC CCAGCCGCTG GAGACGGCCA CGCTGGAGGC CACACTGCAG 
CGCGGACTGT TGACGCTGGT TACCCGGGCC GCCTGGCCCG ACGGCTCGCT CCAACTGGAG 
GCACGGGCCG ACTCGCTGAC GACCACGCCG GTCTACACGA TCGAACGGCT GGTCTTTCGC 
GGCGTGGATC TGGCGGCCTG GGCCGGCCAG GCGCGGCCTC GGACGCGGCT GAACGGTGTG 
CTGACGCTGC ACGGCCGGGG CACGGAGCCG CGCACGATGC AACTTGCCAC AAGAATGCGG 
CTCGATGCCT CGCAGGTGAG CGAGCGGCCC GTTTCGGGAC AGTTCCGTGT GACCGCCGTG 
GCCGGACGCT GGCAGCTCGG CGGGCAGATG GGCGTGGCCG ACGGACAGGC CCGCTTCGAC 
GCCCGACTGC TGCTGGACGG GTCGACGCCC CGCTACGCGC TGACGCTCAC GGCAGAGCAG 
CTCGACCCGA TGCCCCTGCT GGGCATCGAC ACGATCTCGG CCCGGCTCTC GCTCGAGGCC 
GAACTGGAGG GCGAAGGGTT CGATCCGGCC ACCATGCAGG CGTGCGGCCG CCTGCAGAGC 
GACGGGGCCC ATCTCGACGC GCTGGCCGTC GACCGACTGG ACGCCCGCTT TTCGATGGCT 
GAAGGGCTGC TGCGCCTCGA TACGCTCCGG CTGGAGAGCA ACGTGGCGAC GGCACAGGGC 
GGCGGCCAGG TGGCGCTCGT GGATCCCGAA GGCGTGCGCA TGTCGGAACT GACGCTGCAG 
GTGCAACTCC ATCGGCTGCA GCCGCTGCGA CGCCTTGTCG GGGCGCGGCT GCTGGCGCTC 
GACGGCGGCC GGATCGAAGC CCGCGCTTAC GGACGTCCCG GCCAGCTCCG GTTCGAGGGG 
AGCTGGACGC TGCAAAATCT GATCTACGAT GAACTGCGTC TGGTGGAACT CGAGGGCCGT 
ACGGCCGGCG AACTGGACCG GCAACGTCGG TTGTCGAAAG CCGAGCTCCG GTCGCAGGTG 
CATCTGCTGA CGCTGGGCAC CTTCCAGGTG GAAGACGCCC GGGCCGAGCT GCGCTACGAC 
GGCCGGCAGG CCGACTACGA GCTGCGCCTC GATGTCGATC GCCGGCATAC GGCCCGCCTC 
GAAGGCCAGG TACTTCCGAC GGAGCAGGAG ATCCGGCTGA CGCGGCTCGA CATGCGGCTG 
CACGACGCCC GCTGGCGCCT GCTGCAGCCG GCCACGTTCA CCTACGGCGA GGCCTATCGC 
ATTCAGGGCC TGCTGCTCTA CACCGAAGCG CAGGACCAGC AGCTTGCGGC CGACGGCGTG 
ATCGACCCCG ACGGCACGCA GAGCTTCGTC CTGACGCTCG AACGCTTCCG GCTCGAAACC 
GTCACCGATC TGTTCGACCT GGCCGGACTG GGCGGTGCGC TCAGTGGCAC GGTGGACCTG 
ACCGGTCCGG CCGCGGCGCC ACGGCTTGGC GGACAGCTTC TGCTCGATCT GACCTCGGAA 
GGACAACCTG TGGGCGATCT GCAACTGGAT CTGCAGTACG ACAGCCTGCG GCTCCAGGTG 
AATGCCAGGC TCCAGCACCG GGCCGATGCC AGCACGATGA CGCTGCGCGG CACGGTTCCG 
ATGGACCTCC GGCTACAGGT GCCGCCCGAT GCGCCGCCGT TCGATCCGAA CCAGGCATCG 
CTCGATCTGA CGCTGGCCGC CGATACGTTC GCCATCGCCT GGATTCAACC GTTTCTGGAT 
CCCGAAATCC TGCGCGACGT GCGGGGCCGG CTGGCCGGAC GCGTGCACAT CGGCGGCACG 
CTGGCCGCTC CGTCGCTCGA CGGACAGGCC CGGCTTTTCG ATGGGGCCGT CTATCTTCCC 
GAGCTGGGTG TTACCTATCG AGACATCCGG GCCGAGGCCC GCATGGAGGG TAACCGGATC 
ATCCTGACTT CCTTCGCGCT ACACTCGGGC GGACGCCTCA CCGGCGGCGG CACCGTCGAG 
CTGGAGGCGC TCACGCTGGG CACGCTCGAT TTGCGCATGC GGGCCCGCTC GTTCCTGGCC 
GCCGACAACC GCGCCTATCG CACCGTCCTT TCCGGAACGC TCCGGCTGGC CGGCACGACC 
GAACGGCCCG AGATCGAGGG CGACCTGCAG GTGGTCAGCG CCGACATCTA CCTGATCGAG 
CAGACCACGG TAGCCGATCT GGAACCCGTC CAGCTCACCG AAGCCGACCT GCAGATGCTG 
CGCCAGTACT TCGGTGTGCG CATTACCGAA GAGGACACGA CCACCTTCGA CTTCTACGAG 
GCCTCGCGCA TGCGTCTGGA CCTGCGTATG GAACGCGATG TGTGGCTGCG CTCGAATGCC 
AATCCCGAAA TGAACATACA GTTCACGGGC ACGCTTACCG TCCAGAAAGA GCCCTATCAG 
GATCTGCAGC TTTTCGGAAC GATCGAGGTG ATCCCGGAGC GCAGCTACAT CGTGCAGTTC 
GGCAAACGGT TCGAGATTAC GGAAGGAACA CTGTCATTCA ACGGACCGGC CGACGATCCG 
GAGCTCAACC TGAAAGCCCG CTACGTGGTG CCCTCCCGTG AGGATCAATC CAGCCAGGTC 
ACGATCCTGC TCTCGGTCAG CGGGCGGCTG GAGCGGCTCA ACCTGGAGTT TTCGTCCGAG 
AACCCTTCGG GTCTCGAATT GCCGGACATC ATCTCGTACA TTGTCTTCGG CCGACCGGCC 
GGGCAGGCGC TCGCCTCACT GGCGCCCGGC AGCAACGGGG CCGGGGGCGG CTTGCTGGGC 
CGCGGGGCCG GACTGGCGCT CGGCCAGCTG GCCGGCGTCG TCGAAGGTCT GGCCGGCGAA 
GAACTCGGGC TCGATGTCGT CGAGATCGAA CCCGATGGCC TGCAGGGCGC CAAGCTGACC 
GTCGGGAAGT ACGTTTCGCC GCGGCTGTTT GCCGCCGTCA GCCGACCGAT CGCCTTCGGC 
AACAATGCGG CCACGCAACG AACCGAAGTC TACACGGAGT TCACCGTCGA GTACACGATC 
TTCGACGCGA TGATCGTGCG CGTGACCAGC CAGGGAACGA CCATGCGGAT CAACCTGCTG 
TGGCGCTATG CCTACTGA 

 

Protein sequence

MEPTPSITPA RRWLRRIGWA LLGLIGTPIV LVGLLLLVLQ TSWGAEQVRR LIERQVNAQL 
QGGRLEIGAL RGNFVRTLAL YDLALRDTSG RALLALDSLE IAYVPEALLF DRRVHLRRVR 
LIRPRLELTQ QPDSTWDLLR LFGTAPDTTA KETEAGVAQD VWIDHLALRD GTAALHFYTP 
RADSTWHLHR LDVQLDTLRL PPEGWPAFSV RTLEAVLQPP GAPDSVHVLT RLALRERHFR 
LDTLHIWSAR SRVTGGGTLM LPADTGQIEA VQFRLEAQPL ALYDLTPFVA VPDPGRTLAG 
FVTVQGSGRL LQAQAELRTG TGGELALSAT FTPLLDDSVR YRADVQVRRL DPAFFGGPAG 
RLDLQLRADL QGPSLEALDG EARLDVSEAR LGAYRLDSTR LQVRFVEGEG RLTAQTGLRG 
ARLQLDGRGC PFDPTPTYRL DGVLQNLNPA RFLADTSWTG QLNLAFQLEG EGATRLDGRL 
MLQPSRLNRA AIDSGQLAVH RRGDTLRFAL EATLAGGRLQ GRGRLAGAST PSYEVEPFVL 
ERIDVAALLG DTLHSAVSGR LRLRGSGTAP EALRLEATLD LDSLVYGTYR LAPVRVPVRM 
DRGLLTATPE IGLDEGHVAF RLQGRPMARR PRWQIDRGRL ERVNLAAVIP DWSSVLNGSF 
EGFYRGATLA DAEGELTLLL EDSRLNAQPL ETATLEATLQ RGLLTLVTRA AWPDGSLQLE 
ARADSLTTTP VYTIERLVFR GVDLAAWAGQ ARPRTRLNGV LTLHGRGTEP RTMQLATRMR 
LDASQVSERP VSGQFRVTAV AGRWQLGGQM GVADGQARFD ARLLLDGSTP RYALTLTAEQ 
LDPMPLLGID TISARLSLEA ELEGEGFDPA TMQACGRLQS DGAHLDALAV DRLDARFSMA 
EGLLRLDTLR LESNVATAQG GGQVALVDPE GVRMSELTLQ VQLHRLQPLR RLVGARLLAL 
DGGRIEARAY GRPGQLRFEG SWTLQNLIYD ELRLVELEGR TAGELDRQRR LSKAELRSQV 
HLLTLGTFQV EDARAELRYD GRQADYELRL DVDRRHTARL EGQVLPTEQE IRLTRLDMRL 
HDARWRLLQP ATFTYGEAYR IQGLLLYTEA QDQQLAADGV IDPDGTQSFV LTLERFRLET 
VTDLFDLAGL GGALSGTVDL TGPAAAPRLG GQLLLDLTSE GQPVGDLQLD LQYDSLRLQV 
NARLQHRADA STMTLRGTVP MDLRLQVPPD APPFDPNQAS LDLTLAADTF AIAWIQPFLD 
PEILRDVRGR LAGRVHIGGT LAAPSLDGQA RLFDGAVYLP ELGVTYRDIR AEARMEGNRI 
ILTSFALHSG GRLTGGGTVE LEALTLGTLD LRMRARSFLA ADNRAYRTVL SGTLRLAGTT 
ERPEIEGDLQ VVSADIYLIE QTTVADLEPV QLTEADLQML RQYFGVRITE EDTTTFDFYE 
ASRMRLDLRM ERDVWLRSNA NPEMNIQFTG TLTVQKEPYQ DLQLFGTIEV IPERSYIVQF 
GKRFEITEGT LSFNGPADDP ELNLKARYVV PSREDQSSQV TILLSVSGRL ERLNLEFSSE 
NPSGLELPDI ISYIVFGRPA GQALASLAPG SNGAGGGLLG RGAGLALGQL AGVVEGLAGE 
ELGLDVVEIE PDGLQGAKLT VGKYVSPRLF AAVSRPIAFG NNAATQRTEV YTEFTVEYTI 
FDAMIVRVTS QGTTMRINLL WRYAY