| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_0696 |
|---|
| Symbol | |
|---|
| ID | 8567333 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | + |
|---|
| Start bp | 802331 |
|---|
| End bp | 803731 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF162 |
|---|
| Protein accession | YP_003289982 |
|---|
| Protein GI | 268316263 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.527236 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGGAT TCATCGAACT GCCTGTGGTC GATCATGCCC GGCTGGCCGC CCGCTTTGCG
GCCGATGCCG AACGTGTGCA GTGGCACGAT GCACTGCTCT GGCAGGTGCG GCTAAAGCGC
GATCGGGCCG CTGCCGAGGT GCCTGAATGG GAGGAATTGC GGCGACTGGC CTCGGAGATC
AAGGCGCACG TGCTCACGCA TCTGGATCGC TACCTGGAGC AGTTCGAGGC ACAGGCGCGC
GCCTGCGGTA TCCAGGTGCA CTGGGCGCGC GATGCCGCCG CCCACAACCG TATCGTGCAT
GAGCTGCTGG CCGCCCGCCA CGTGCGGCGT GTGGTCAAAA GCAAGTCGAT GCTGACCGAA
GAGTGCGGTC TGAACCCCTA CCTGGAGGCG CGTGGCATCG AGGTGGTCGA TACGGACCTG
GGCGAGCGCA TCATGCAATT GCTCCGGCAG CCGCCCAGCC ACATCGTAAC CCCGGCCATC
CACCTGCGTC GCGAAGAGGT GGCCCGGCTC TTTCATGAAA AGCTCGGCGT GCCCGAAAAC
CTGACGCCCG GTGAACTGGT GGCCGTCGCC CGCCGGGTGC TTCGCCAGAA GTTTCTGGAA
GCCGAGGCGG CCATCACGGG CGTCAACTTT GCCGTGGCCG AAACCGGAAC GCTCGTCGTC
TGCACGAACG AGGGCAACGC CGATCTGGGC ATGCACCTGG CACCGGTGCA CATTGCCGCA
ATGGGGATCG AAAAGCTCAT CCCGCGCCTG GTCGATCTGG GCGTGTTTCT GCGGTTGCTG
GCGCGCAGTG CTACCGGCCA GCCCCTCACG GTGTACACGA CGCACATCGG TCGGCCGCGT
CCCGGCCAGG AAGTGCACGT GGTGCTGGTC GATAACGGCC GAAGCCGTCG GCTGGGGCTG
CCACGCTTCT GGCCGGCGCT GAAGTGCATT CGGTGTGGGG CCTGTATGAA CACGTGCCCG
GTCTATCGCC GGAGCGGTGG TTACAGCTAC GGAGCCACGG TGCCCGGACC GATCGGCGCC
ATTCTGATGC CAGGCTACGA CACGGCCCGC TATCGGACGC TGCCCTATGC TTCATCGCTG
TGCGGCTCGT GTCGCGAGGT GTGTCCCGTA CAGATCGACA TCGACGAGCA GCTGTATGCC
TGGCGACAGG AGGTCGGTCC GCGCTATGCC TCCCGTCTGA AGCGCCTCGT CATGCAGCTG
GCCGCCCGGG TGCTGGCTTC GCCGAAGCGT TACCGGTGGG GCGGACGCCT GCTGCGCTGG
AGCCTGCGGC GCCTGTCACG TCGGGTCCTC TATGGCCCCT GGAACGGCTG GGGACGTGCC
CGCGAGCTAC CCCCGGCCCC GGCGGAAAGT TTTCTGGAAT GGTATCGGAA AACCAGGGCC
TCGGCCACGG GGCAACAATA A
|
|---|
| Protein sequence | MEGFIELPVV DHARLAARFA ADAERVQWHD ALLWQVRLKR DRAAAEVPEW EELRRLASEI
KAHVLTHLDR YLEQFEAQAR ACGIQVHWAR DAAAHNRIVH ELLAARHVRR VVKSKSMLTE
ECGLNPYLEA RGIEVVDTDL GERIMQLLRQ PPSHIVTPAI HLRREEVARL FHEKLGVPEN
LTPGELVAVA RRVLRQKFLE AEAAITGVNF AVAETGTLVV CTNEGNADLG MHLAPVHIAA
MGIEKLIPRL VDLGVFLRLL ARSATGQPLT VYTTHIGRPR PGQEVHVVLV DNGRSRRLGL
PRFWPALKCI RCGACMNTCP VYRRSGGYSY GATVPGPIGA ILMPGYDTAR YRTLPYASSL
CGSCREVCPV QIDIDEQLYA WRQEVGPRYA SRLKRLVMQL AARVLASPKR YRWGGRLLRW
SLRRLSRRVL YGPWNGWGRA RELPPAPAES FLEWYRKTRA SATGQQ
|
|---|
| |