Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_0688 |
Symbol | |
ID | 8567325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 790687 |
End bp | 792189 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | RagB/SusD domain protein |
Protein accession | YP_003289974 |
Protein GI | 268316255 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0549039 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGAT ATACACTCAT TCTGATTGCC GGCCTGCTGA TCGCTTCGTG CGACAGCCTG ATCGACGTGC AGCCGCAATC GGACATTTCG ACGGAGACCT TCTTCCGCAC GCCTGCGCAG ATTGATCAGG CGATCCTGGG CGCCTACGGC TATCTGCAGA CGCTTTACAG TGGCACCGAT TGGAATGGCG CTTTTGTCAT GCTCGAAATG CGTTCCGATA ACACAACATA TCAGTTTAAT GTGGACAATC GGGGCGCGCT TCATGCCGAG CAGATTGATG AATTCAGAGA GCAGTCTGAG AATGTAGTGT TGCAGTTTTT CTGGCAGACT TCCTATCAGG GAATTTATCA GACCAATGTG ATACTGGATC GAATTGAGTC GGTGAATTAT GGCAATAATA CTGCTTTGAA AGATCAGCAT ATTGGCGAAG CAAAATTTCT GCGTGCTTTT AACTATTTCA ATCTGGTCCG GCTGTTCGGC GGCGTGCCGT TGAAGTTGCA CGAAATCAAA ACGCCATCGG AAGTGTATGC CGAAGGGCGG GCTTCGGTGG ACGAGGTCTA TGCACAGATT CTGTCCGACG TGCAGGATGC GGTGCAGAAG TTGCCCTGGA CCTATCCGGC GGAACAGGCC GGCCGGGCCA CGAAAGGAGC GGCGCTGATG CTGCTGGCCG AAGTGCATAT GACCCGCCAG AACTTCAGCG AGGCGCGTGC CGCTCTGGAG CAGATCGTAA GTGCGGGGAT CTACGAACTG CTTCCGGATT ACGCGGAGGT GTTCAACCCG GCCAGTAAAA ACCACCCGGA ATCCATCTTT GAGATTCAGT ACAGCAACAA CTACGAGGGC GAAGAGGCGG ACTGGATCTT TCAGTTTGCG CCGTTCAATT CGGGCTGTGC GCTGATGCAG GGGCCGTGTC AAGGATCTCG TCAATATGCT TGGAATATTC CTACTCGAGA TATCATAGAA GCCTATGAGC CCGGTGATCT GCGCAAGGAT GTGTCCATCG GCTGGTACGA AGATCCTTCC AATGTGCAGT ATGACGTCGC CATTGGCGAT TCCATTCCCT ACGTCAAGAA GTTTGCCTGG CCCTTCAACG CACTGAACCG GACGAACGAA AACTGGCCGG TTTACCGCTA CGCGGAGACG CTGCTGCTCC TGGCCGAAGC GCTGAACGAA GAAGGACGTA CGGCCGAGGC GGAGCCCTAT CTGAACGCGG TGCGGGCACG GGCCGGGCTG GCGCCGCTCA CGGGGCTGTC TCAGGAGGAA TTCCGGCAGG CCGTCTGGCA TGAGCAGCGG GTGGAACTGG CCTTCGAGAA CAAGCGCTGG TTCCAGTTGC TCCGGACCGG CCGGGCGCTG GACGTGATGC GTGCCCACGG AGAGCAGATG CGTCAGATTT CGGAGCGCAT GGCCCGCGAA AATGCCTACC AGATCGAGCC GTACCGGCTG CTCTACCCCA TTCCGCTGCG CGAAGTTATC TTGAATAACC TGGAACAGAA CCCCGGCTAT TAA
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Protein sequence | MKRYTLILIA GLLIASCDSL IDVQPQSDIS TETFFRTPAQ IDQAILGAYG YLQTLYSGTD WNGAFVMLEM RSDNTTYQFN VDNRGALHAE QIDEFREQSE NVVLQFFWQT SYQGIYQTNV ILDRIESVNY GNNTALKDQH IGEAKFLRAF NYFNLVRLFG GVPLKLHEIK TPSEVYAEGR ASVDEVYAQI LSDVQDAVQK LPWTYPAEQA GRATKGAALM LLAEVHMTRQ NFSEARAALE QIVSAGIYEL LPDYAEVFNP ASKNHPESIF EIQYSNNYEG EEADWIFQFA PFNSGCALMQ GPCQGSRQYA WNIPTRDIIE AYEPGDLRKD VSIGWYEDPS NVQYDVAIGD SIPYVKKFAW PFNALNRTNE NWPVYRYAET LLLLAEALNE EGRTAEAEPY LNAVRARAGL APLTGLSQEE FRQAVWHEQR VELAFENKRW FQLLRTGRAL DVMRAHGEQM RQISERMARE NAYQIEPYRL LYPIPLREVI LNNLEQNPGY
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