Gene Rmar_0688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0688 
Symbol 
ID8567325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp790687 
End bp792189 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content56% 
IMG OID 
ProductRagB/SusD domain protein 
Protein accessionYP_003289974 
Protein GI268316255 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0549039 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGAT ATACACTCAT TCTGATTGCC GGCCTGCTGA TCGCTTCGTG CGACAGCCTG 
ATCGACGTGC AGCCGCAATC GGACATTTCG ACGGAGACCT TCTTCCGCAC GCCTGCGCAG
ATTGATCAGG CGATCCTGGG CGCCTACGGC TATCTGCAGA CGCTTTACAG TGGCACCGAT
TGGAATGGCG CTTTTGTCAT GCTCGAAATG CGTTCCGATA ACACAACATA TCAGTTTAAT
GTGGACAATC GGGGCGCGCT TCATGCCGAG CAGATTGATG AATTCAGAGA GCAGTCTGAG
AATGTAGTGT TGCAGTTTTT CTGGCAGACT TCCTATCAGG GAATTTATCA GACCAATGTG
ATACTGGATC GAATTGAGTC GGTGAATTAT GGCAATAATA CTGCTTTGAA AGATCAGCAT
ATTGGCGAAG CAAAATTTCT GCGTGCTTTT AACTATTTCA ATCTGGTCCG GCTGTTCGGC
GGCGTGCCGT TGAAGTTGCA CGAAATCAAA ACGCCATCGG AAGTGTATGC CGAAGGGCGG
GCTTCGGTGG ACGAGGTCTA TGCACAGATT CTGTCCGACG TGCAGGATGC GGTGCAGAAG
TTGCCCTGGA CCTATCCGGC GGAACAGGCC GGCCGGGCCA CGAAAGGAGC GGCGCTGATG
CTGCTGGCCG AAGTGCATAT GACCCGCCAG AACTTCAGCG AGGCGCGTGC CGCTCTGGAG
CAGATCGTAA GTGCGGGGAT CTACGAACTG CTTCCGGATT ACGCGGAGGT GTTCAACCCG
GCCAGTAAAA ACCACCCGGA ATCCATCTTT GAGATTCAGT ACAGCAACAA CTACGAGGGC
GAAGAGGCGG ACTGGATCTT TCAGTTTGCG CCGTTCAATT CGGGCTGTGC GCTGATGCAG
GGGCCGTGTC AAGGATCTCG TCAATATGCT TGGAATATTC CTACTCGAGA TATCATAGAA
GCCTATGAGC CCGGTGATCT GCGCAAGGAT GTGTCCATCG GCTGGTACGA AGATCCTTCC
AATGTGCAGT ATGACGTCGC CATTGGCGAT TCCATTCCCT ACGTCAAGAA GTTTGCCTGG
CCCTTCAACG CACTGAACCG GACGAACGAA AACTGGCCGG TTTACCGCTA CGCGGAGACG
CTGCTGCTCC TGGCCGAAGC GCTGAACGAA GAAGGACGTA CGGCCGAGGC GGAGCCCTAT
CTGAACGCGG TGCGGGCACG GGCCGGGCTG GCGCCGCTCA CGGGGCTGTC TCAGGAGGAA
TTCCGGCAGG CCGTCTGGCA TGAGCAGCGG GTGGAACTGG CCTTCGAGAA CAAGCGCTGG
TTCCAGTTGC TCCGGACCGG CCGGGCGCTG GACGTGATGC GTGCCCACGG AGAGCAGATG
CGTCAGATTT CGGAGCGCAT GGCCCGCGAA AATGCCTACC AGATCGAGCC GTACCGGCTG
CTCTACCCCA TTCCGCTGCG CGAAGTTATC TTGAATAACC TGGAACAGAA CCCCGGCTAT
TAA
 
Protein sequence
MKRYTLILIA GLLIASCDSL IDVQPQSDIS TETFFRTPAQ IDQAILGAYG YLQTLYSGTD 
WNGAFVMLEM RSDNTTYQFN VDNRGALHAE QIDEFREQSE NVVLQFFWQT SYQGIYQTNV
ILDRIESVNY GNNTALKDQH IGEAKFLRAF NYFNLVRLFG GVPLKLHEIK TPSEVYAEGR
ASVDEVYAQI LSDVQDAVQK LPWTYPAEQA GRATKGAALM LLAEVHMTRQ NFSEARAALE
QIVSAGIYEL LPDYAEVFNP ASKNHPESIF EIQYSNNYEG EEADWIFQFA PFNSGCALMQ
GPCQGSRQYA WNIPTRDIIE AYEPGDLRKD VSIGWYEDPS NVQYDVAIGD SIPYVKKFAW
PFNALNRTNE NWPVYRYAET LLLLAEALNE EGRTAEAEPY LNAVRARAGL APLTGLSQEE
FRQAVWHEQR VELAFENKRW FQLLRTGRAL DVMRAHGEQM RQISERMARE NAYQIEPYRL
LYPIPLREVI LNNLEQNPGY