Gene Rmar_0658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0658 
Symbol 
ID8567295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp751989 
End bp753128 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content70% 
IMG OID 
Productanti-FecI sigma factor, FecR 
Protein accessionYP_003289944 
Protein GI268316225 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGCCG ATTTTGACGC ATTGCCTTTC CGGGAGGAGT TGCCGCCGGA GGAGCGAGCA 
GCGTTGCAGG CATTGTTGCA GCGGGAGCCG GCGCTGGCGC AGGCGCTCCG GCACTGGGAG
GCGCTGCAGG CCCATCTGCG TGAGCGCGTG GAGGCGGCGG TGCCGGATCG GCGGTTGCTC
GTACTCTACG CGCTGGTTCG CTGCGGACGC GAAGCGCTGC TGACGCCGGA AGAACGGGCC
GAACTGGAGG CGGCGCGGCC CGCACTGGAG CGGGCGTTGC AGGCGCTACC GGGACTGGAA
ACGGTCGCGG AAGATGTTGC GGCGGCCTGT GCCGACTTCG AGGAGGCCTG GGCGGCGCAT
TTTCCCTCGG AGCAGCGTCG GATGCGTCCG GCGGCCGAAC GGCGGCCACG TCCACTGCAC
CGTCGGCCGG CTTATCGCTG GGTGGTGCGT GTGGCGCTGA GCGGGGTGGT CCTGGCGCTG
GTCGGTATTC TCTGGTGGCA GCAGACCGGG CAGCGGGTTG AATGGACGGT GGCCGACGGC
GCCGTCGAGG TGCGCACGCT GGCCGATGGT TCCACGGTGC GGCTGGTGGG ACCGGCCGTG
CTGCGCTACG CCGTCCGCTT CGACCGAAAG GTGCAGCTCG AAGGACAGGC CTTTCTGGAG
GTACAACCCG ACACGCGACC CTTCGTCGTG GAGACGCCCG AAGCGGTCGT CACGGTGCTG
GGCACGCGCT TTGGCGTGCG GAGCGCCGGG GGACGGACCG AGGTGGTGCT CGTCGAAGGC
CGCGTGGCGC TGAACGGACG GGGGCGCACC GAAGCGCCGG TCGTGCTGAC GCCGGGGCAG
CGAAGCCTTG TGGCGGCCGG ACAGGCACCC GAACCGCCCG TGCCGGTGCG GGTGCCCGAG
GCGCTTCGGT GGACCGGTCT GCATATCTTC GACGGCATGC CGCTGGGCGA AATCGCCCGC
TATCTCTCGG ACTTTTACGG CGTTTCGATT GCCGTGGACG CGTCGCTGGC CGGGGAGCCC
ATCGTGGGGA CGTTCGCACA GGATCAGCCC CTTCCCGAAA TCCTGCAGGC GCTGGCCGCC
ACGCTGGGTG CTCGAGTGGA GCAACTGCCG GATGGTTACC ATCTGATTCC CATCGGCTGA
 
Protein sequence
MAADFDALPF REELPPEERA ALQALLQREP ALAQALRHWE ALQAHLRERV EAAVPDRRLL 
VLYALVRCGR EALLTPEERA ELEAARPALE RALQALPGLE TVAEDVAAAC ADFEEAWAAH
FPSEQRRMRP AAERRPRPLH RRPAYRWVVR VALSGVVLAL VGILWWQQTG QRVEWTVADG
AVEVRTLADG STVRLVGPAV LRYAVRFDRK VQLEGQAFLE VQPDTRPFVV ETPEAVVTVL
GTRFGVRSAG GRTEVVLVEG RVALNGRGRT EAPVVLTPGQ RSLVAAGQAP EPPVPVRVPE
ALRWTGLHIF DGMPLGEIAR YLSDFYGVSI AVDASLAGEP IVGTFAQDQP LPEILQALAA
TLGARVEQLP DGYHLIPIG