Gene Rmar_0657 details

Gene Information

• Locus tag: Rmar_0657
• ID: 8567294
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: +
• Start bp: 751365
• End bp: 751907
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 64%
• Product: RNA polymerase, sigma-24 subunit, ECF subfamily
• Protein accession: YP_003289943
• Protein GI: 268316224

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCCGTG CGCCGAACAT TCCGGCCCGG CTGGTGGCCC GGGCGCGGCA GGGCGAGTCC 
GAGGCGCAGA ACCTGCTGCT GCGTCGACTG GAGCCGGTGC TGCGTGCTTT TTTCTTCAAG 
CGGCTGGGCG ACGTGCCGGA AATCGATGAT CTGGTGCAGA ATACGCTGCT CCGGGTGCAT 
ACAGGACTTC CGGATCTGAA GGACGACGCC CGGCTCAAGG CGTTCGCCAT GAAGGCGGCG 
CTGTTCGAGT TGCAGGACTT CTACCGGGGG CGGTATCACG GACGAGAGCA GCTTTTCGAT 
CCGGAGCAGC CACCGTCGGT GGCCGATGAT CCCGGAGAAA GCGAACCCCG GCTGGATCTG 
GAGCAGGCAC TCCAGGCGCT CACCCCGCAT GCCCGGCGCA TTCTGGAGCT TCGGGCCTAT 
GGCTATCGCT ATCAGGAAAT CGCCCGAATG CTCAGCACCA CCGAGGCCGC CGTCAAGATG 
CAGGTCAAGC GTGCCTTCGA AAAGATGCGC CAGCTGCTGC CCGGCTGGTC GGAAAAGTCC 
TGA 

 

Protein sequence

MARAPNIPAR LVARARQGES EAQNLLLRRL EPVLRAFFFK RLGDVPEIDD LVQNTLLRVH 
TGLPDLKDDA RLKAFAMKAA LFELQDFYRG RYHGREQLFD PEQPPSVADD PGESEPRLDL 
EQALQALTPH ARRILELRAY GYRYQEIARM LSTTEAAVKM QVKRAFEKMR QLLPGWSEKS