Gene Rmar_0630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0630 
Symbol 
ID8567266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp715957 
End bp717804 
Gene Length1848 bp 
Protein Length615 aa 
Translation table11 
GC content65% 
IMG OID 
Productpenicillin-binding protein 2 
Protein accessionYP_003289917 
Protein GI268316198 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.629085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGACT ACCGGGTTCG AGCGCGGATT TTCGTCGGGG TCATTGCCCT GCTGCTGGGG 
CTGCTGGTGC TGCGTCTGGC ACAGATGCAG CTCTGGCAGA CCGAGCTGTA CGCAGGCGAG
TCGCGCAGCA ATGCAGTGCG CGAGCAGCGC GTGATACCGG CCCGCGGTGC CATCTACGAC
CGCAACGGCG TGCTGCTGGT GGATAACGCG CCGGCCTATT CGCTGCTGAT CACGCCCCGG
TATTTCGATC CGAAAAACAT CCCCCTGCTG GCCCGGCTGC TGGAGGTGCC CGACTCGGTG
GTGGCCAATC GGCTGGCGCA GGCGCGGGCC TGGAGCGCCT ATCGCCCCAG CCGGGTCTTT
ACGGACCTGC CGTTCGAGAC CTTCAGCCGC GTCGTCGAAA ATCTCTACCG CCTGCCCGGG
GTCCAGTACG AGATCGATCA GCGCCGCCGC TATCACACGC CGGTCCGCGC GGCCCATGCG
CTGGGCTACG TTCGCGAGAT CACCCGGGCC GAGCTGGAAC AGCTCCGGGA CGATGGCTAT
GCGATGGGCG ATCGCATCGG TAAAGCCGGG CTCGAAAAGT TCTACGAGAA GGCTCTGCGC
GGTGTGCCGG GACGTGCCTT CAAGCTCGTC AACATCCACG GCCAGGAGAT CAAGTCCTAT
CGCGACGGGG CCGAAGACGT ACCGCCCATC AGTGGCTACG ATCTGCATCT CGGGATCGAC
TACCGTGTGC AGGCGCTGGC CGAGTCGCTC TTCGTGGGCA AACGCGGAGC GGCCGTGGCG
CTCGATCCCA ACAACGGCGA GATCATCGCG CTGGTGAGCA TGCCCGACTT CGATCCGGAG
GTGCTCTCCG GACCGATCGA CCCGGCGACC TGGCGCTACC TGACCACCAG CCCCGAAAAG
CCGCTGTTCA ATCGGGCCAC GATGAGCGGC GTGCCGCCGG GTTCGACCTG GAAGCCGTTC
ATGGCCCTGG TGGGGCTGCA GGAGGGCGTC ATCACGGCGC GTAGCACGAT CTACTGTCCA
GGTGGCTACA TGCTGGGGGG CCGGCTTTTC CGGTGCCACG GCGGCGCGCA CGGATCGCTC
GACGTGCGCG AGGCGATTCA GCTTTCCTGC AACACGTTTT TCTTTACCGT GATGATGCGT
CTCGACGTGA ACACGCTTCG CCGCTGGGCC AACCGCTTCG GATTCGGTGT GCCGGCGCCC
ATGGACATCG CCGAGCAGAA TCCGGGCCTG ATCCCCGATT CGGCCTACTA CAACCGACGT
TATCCACGCG GCTGGACGGC CGGCTACACG ATCAACCTGG GCATCGGACA GGGCGATATG
ACCGTCACAC CCATGCAGCT GGCGCGCTAC GTGGCGGCCA TCGCCAACGG GGGTACGCTC
TATCCGCCCC ATCTGGTGCG TGAGCTGGTC CACCCGGAAA CCGGCGAAAT CCTCAAACCC
CAGTTGCCCC CGCCCGAACA CATTCCCATC AAGCCAGAAC ACTTTCAGGT TGTGCGGGAA
GGCATGCGGC GCGTGATGGA AGCGGGCACC GGCCGGTGGG TCCAGATCCC GGGCATTCCG
AGCGGCGGCA AGACGGGCAC GGCGCAGGCG CCCGGCGGCC GCAAGGACCA TTCGCTCTTC
ATCATGTTTG CACCCTACGA TGCGCCGAAG ATCGCCATTG CGGTGTTTGT GGAAAACGCA
GGCTTCGGCG CCACGGTCGC CGCGCCTATC GCCAGCCTGA TGGCCGAGCT GTACCTGACC
GGCGAGGTCG CCACTACGCC GCAGCGGCGC TACCTGCTCG AGCATGTACT CCGCCAGCGG
AGTCAGCCGC TGGATGAACC CTCCGTAACG CAGGCCGCTT CCCGATAA
 
Protein sequence
MIDYRVRARI FVGVIALLLG LLVLRLAQMQ LWQTELYAGE SRSNAVREQR VIPARGAIYD 
RNGVLLVDNA PAYSLLITPR YFDPKNIPLL ARLLEVPDSV VANRLAQARA WSAYRPSRVF
TDLPFETFSR VVENLYRLPG VQYEIDQRRR YHTPVRAAHA LGYVREITRA ELEQLRDDGY
AMGDRIGKAG LEKFYEKALR GVPGRAFKLV NIHGQEIKSY RDGAEDVPPI SGYDLHLGID
YRVQALAESL FVGKRGAAVA LDPNNGEIIA LVSMPDFDPE VLSGPIDPAT WRYLTTSPEK
PLFNRATMSG VPPGSTWKPF MALVGLQEGV ITARSTIYCP GGYMLGGRLF RCHGGAHGSL
DVREAIQLSC NTFFFTVMMR LDVNTLRRWA NRFGFGVPAP MDIAEQNPGL IPDSAYYNRR
YPRGWTAGYT INLGIGQGDM TVTPMQLARY VAAIANGGTL YPPHLVRELV HPETGEILKP
QLPPPEHIPI KPEHFQVVRE GMRRVMEAGT GRWVQIPGIP SGGKTGTAQA PGGRKDHSLF
IMFAPYDAPK IAIAVFVENA GFGATVAAPI ASLMAELYLT GEVATTPQRR YLLEHVLRQR
SQPLDEPSVT QAASR