Gene Rmar_0607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0607 
Symbol 
ID8567241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp687235 
End bp688632 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content61% 
IMG OID 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family 
Protein accessionYP_003289895 
Protein GI268316176 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.551274 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAAGG CCTGTGTGTT TGTGGTGGAT GACGAGCCCA AGCTGGGCGA GCTGTTTGCC 
AACGTGCTCC GGCGGGACGG CTACGAGGTG CGCGCGTTCG TGCATCCTCA GGCGATGCTG
GAAGCCATCG AAGACGGGCA GCAACCCGAC GTGGTGCTGG CCGATCTGAT GATGCCGGAG
ATCAACGGCA TCGAGCTGCT GGAACGGCTG CGTAAACGTC GGCTTCACGT GCCGGTCATT
ATCATGACGG CGCATTCGTC GGTGCAGACG GCCGTCGAGG CCATGCGCCG GGGTGCCTTT
CACTATCTGC AGAAGCCGGT CAATCTGGAA GAAATGCGCA TGCTGCTCAA GAAGGCCATC
GGCCGGAATG AGCGCACGTC GGTTTCACAG CCCTCGCCGC AGGGGGAAGC GGCCGCCTAT
CCGATCGAAG GCATTCTGGG CGACAGCGAG CCGATTCGTC GGGTGCGCCA GACCATCGAG
ATGCTCCGGG ACGTGCCGGG TACGATCGTA CTGATCCGGG GCGAAACCGG CACCGGCAAA
AACCTGGTGG CCCGCACCAT TCACGCCAAC TCCTGCTACA GCAGCGGGCG TTTTGTGGAG
ATCAACTGTG CGGCGCTGCC CGACAACCTG CTGGAGGCCG AACTGTTCGG CTATGAAAAA
GGCGCCTTCA CCGATGCACG CACCTCCAAG CCGGGTCTGC TCGAAGTGGC CGACGGGGGG
ACCGTCTTTC TGGACGAGAT CGACTCGATG AGTCTGGCGC TGCAGGCCAA ATTGCTTTCG
TTTCTGGAAA GCCGGACGTT CCGGCGTCTG GGCGGTATCG ACGACATTCA GGTCAACGTG
CGTATTCTGT GCGCCACCAA CGTCAACCTG GAGCAGCTGG TGGCCGAGCG GAAGTTCCGG
CAGGACCTCT TCTACCGGAT CAACGTGGTC AATATCTACC TGCCGGCGCT TCGGGAGATG
GGCCGCGATG TGCTGCTGAT CGCCCGGTAT TTCATTGAGC AGTTCAACAG CGAGCTGGGC
CGGCAGGTGA AGGGCCTGAC GCCCGAAGCG GAAAAGAAGC TGCTGGACTA TCACTGGCCC
GGCAACGTGC GTGAGCTGCG CAACGTGCTC GAACGGGCCA TGATTTTCAA CAGAAAGGAG
TGGATCGACG CCGACGATCT GCACCTGCTG CCTGCTACTG CGTCTTCCAA CGGAGTGGCC
CTGCCGCCTT CCAACGGTGT GTTCTACTTC CCCAGCGGGA GCACGCTGGA AGAGCTGGAA
AAAGCCTATA TCCTGCACAC GCTCAAGCAC TACAAGGCCA GCTTCACCGA AGCCGCCCGC
ATGCTGGGCA TTTCCAAAAA GACGCTCTGG GAGAAGCGCA AACGCTACAA TCTGGATCGC
GAGCTGGCGC GCTCCTGA
 
Protein sequence
MSKACVFVVD DEPKLGELFA NVLRRDGYEV RAFVHPQAML EAIEDGQQPD VVLADLMMPE 
INGIELLERL RKRRLHVPVI IMTAHSSVQT AVEAMRRGAF HYLQKPVNLE EMRMLLKKAI
GRNERTSVSQ PSPQGEAAAY PIEGILGDSE PIRRVRQTIE MLRDVPGTIV LIRGETGTGK
NLVARTIHAN SCYSSGRFVE INCAALPDNL LEAELFGYEK GAFTDARTSK PGLLEVADGG
TVFLDEIDSM SLALQAKLLS FLESRTFRRL GGIDDIQVNV RILCATNVNL EQLVAERKFR
QDLFYRINVV NIYLPALREM GRDVLLIARY FIEQFNSELG RQVKGLTPEA EKKLLDYHWP
GNVRELRNVL ERAMIFNRKE WIDADDLHLL PATASSNGVA LPPSNGVFYF PSGSTLEELE
KAYILHTLKH YKASFTEAAR MLGISKKTLW EKRKRYNLDR ELARS