| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_0605 |
|---|
| Symbol | |
|---|
| ID | 8567239 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | - |
|---|
| Start bp | 685012 |
|---|
| End bp | 686034 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | transport system permease protein |
|---|
| Protein accession | YP_003289893 |
|---|
| Protein GI | 268316174 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGATGC CTCCGCTCAC GCTGAGCTGC TGGCTGCTCG GGCTGCTGCT CGCCTCGGTG
GTGGCCGGGG TTGCGCTCGG AAGCGTCTCG CTGGCGCCGG ACGTGGTGGT GCGCGTGCTG
CTCGGGCGGA TCACCGGCGC GGCGGTCGAT CCGGTGGCCG AACGGATCGT CTGGCAACTC
CGGCTGCCCC GCGTGCTGAT GGCCCTGCTG ACCGGCGGAG GCCTGGCCAT CGTGGGCGTG
GCCATGCAGA CCCTGGTGCG CAATCCGCTG GCCGAGCCCT ACATTCTGGG ACTTTCGAGC
GGGGCCAGCG CCGGCGCTTC GCTGTTCTAC CTGGGCTTTC TTCCACCGCT GCTATCGCGC
ACGCTCTCGA TGCCGCTGGC GGCTTTTCTG GGCGCCCTGC TGGCGCTGAC GCTCGTCTAT
CTTGTGGCGC GACAGAACGG CGTGCTTTCG GTCACGCGGC TGCTGCTGGG CGGCGTGGCG
ATCTCGGCGC TCATGGCTTC GATCACGTCG TTCGTCACGT TCGCCTCGCC CAGTCCCGAC
AAGCTCCGCG CCGTGCTGTT CTGGCTGCTG GGTTCGTTCA GCGGGGCCCG CTGGTCGCTG
CTGCCGCTGC CCGCTCTGGC CACGCTGCTG GGGCTGCTCG GCATGCTGGC GCTCACGCGC
CCCATGGATC TGCTGCTGCT GGGCGAGGAG CCAGCCGCCC AGCTCGGCAT CCCCGTCGAA
CTGGCCAAGC GCCTGCTGAT CCTGTTCGCG GCGCTGGTCA CCGGGACGCT CGTGGCGTTT
TCCGGAACGA TCGGCTTCGT CGGGCTGATC ATTCCGCATG CCGTCCGCGC CCTGACGGGC
GTGCCACACC GGCGGGTGGT ACCGCTGAGC TTCCTGCTGG GCGCTGCCTT TCTGATCTGG
GCCGATCTGG TCGCCCGCCT GCTGCTTCCC GGCACCGAGC TACCGGTGGG TGTCGTCACC
GCCCTCTGCG GCGTGCCGTT CTTTCTGATG CTGCTACGCC GCAGCCATTA CCGCTTCGGC
TGA
|
|---|
| Protein sequence | MRMPPLTLSC WLLGLLLASV VAGVALGSVS LAPDVVVRVL LGRITGAAVD PVAERIVWQL
RLPRVLMALL TGGGLAIVGV AMQTLVRNPL AEPYILGLSS GASAGASLFY LGFLPPLLSR
TLSMPLAAFL GALLALTLVY LVARQNGVLS VTRLLLGGVA ISALMASITS FVTFASPSPD
KLRAVLFWLL GSFSGARWSL LPLPALATLL GLLGMLALTR PMDLLLLGEE PAAQLGIPVE
LAKRLLILFA ALVTGTLVAF SGTIGFVGLI IPHAVRALTG VPHRRVVPLS FLLGAAFLIW
ADLVARLLLP GTELPVGVVT ALCGVPFFLM LLRRSHYRFG
|
|---|
| |