Gene Rmar_0604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0604 
Symbol 
ID8567238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp683846 
End bp685027 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content72% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003289892 
Protein GI268316173 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACGCC CCGCTGCGAC GCCGACCACG CGACGGGCCC TCTGGCTGAT CGTGCTGTTC 
GGGCTGGTCA GCCTGCTGGC CGATCTCACC TACGAAAGCG CCCGGAGCCT GATCGGTCCC
TACCTGGGCT GGCTGGGCGC CTCGGCCACG GCGGTGGGCG TGGTGGCCGG TGCGGGCGAG
CTGGTGGGCT ACGGGCTGCG GCTCGCCAGC GGCTATCTGA GCGACCGGAC GCGCCGCTAC
TGGACGCTCA CGTTGCTGGG CTATGCGGTG AACCTGCTGG CCGTACCGGC GCTGGCGCTG
GCCGGACGCT GGGAGGTGGC GGCCGCGCTG ATCATCGCCG AACGCGCCGG CAAGGCGCTG
CGCACCCCGG TCCGCGACGT GCTGCTCTCG CACGCCACGG CACAGGTAGG ACATGGCCGG
GGATTCGGAC TGCACGAAGC GCTGGATCAG ATCGGTGCCG TGGCCGGACC GCTCCTGATG
GCCGGGGTGC TGCTGCAGGG CGGCGACTAC CGGACGGCCT TCGCGTTGCT GCTGGTGCCG
GCACTGCTCG CGCTGGGGCT GCTCGGCGTG GCCCGGCTAC GCTACCCGCG GCCGCAGGAG
CTGGAAGCAG CCCGTCCGAC GGCGCCGGCG GATCGCACGT TTCCGCGCAC GTTCTGGATC
TACCTGACCG GGGCCGGACT GCTGGCCGCC GGATACGCGG ACTTCCCGCT GATCGCCTAT
CACTTCCGGG AGGCCGGCGT CTTGCCCGAA GCCTGGATTC CCCTGAGCTA TGCGCTGGCA
ATGGGCGTCG ACGCAGGGGC GGCCCTGCTG CTGGGGCGCT GGTTCGACCG CTTCGGCCCG
ATCACGCTGG CGCTGGCCGT GGCGCTGACC TCCGCCTTTG CACCGCTGAC GTTTCTGGGC
GGTGCGGCGG CCGCCTGGGT GGGCATGGCG CTCTGGGGCG TGGGCATGGG GGCGCAGGAG
TCCATCCTGC GGGCCACGCT GGCCCGAATG ATCGCCCCGG AACGGCGGGG CACCGCCTTC
GGACTGTTTC ATGCGGTCTT TGGCGTGTGC TGGTTTGCGG GGAGCGCGCT GCTGGGAGTG
CTCTACGACA CGTCCATCCC GGCGCTGGTC GGGGTGGCCG TGGCGCTGCA GGTGCTGGCC
GCGCTGGTAT TGGGCTGGAT GAGTCGTCAG CCGAAGCGGT AA
 
Protein sequence
MTRPAATPTT RRALWLIVLF GLVSLLADLT YESARSLIGP YLGWLGASAT AVGVVAGAGE 
LVGYGLRLAS GYLSDRTRRY WTLTLLGYAV NLLAVPALAL AGRWEVAAAL IIAERAGKAL
RTPVRDVLLS HATAQVGHGR GFGLHEALDQ IGAVAGPLLM AGVLLQGGDY RTAFALLLVP
ALLALGLLGV ARLRYPRPQE LEAARPTAPA DRTFPRTFWI YLTGAGLLAA GYADFPLIAY
HFREAGVLPE AWIPLSYALA MGVDAGAALL LGRWFDRFGP ITLALAVALT SAFAPLTFLG
GAAAAWVGMA LWGVGMGAQE SILRATLARM IAPERRGTAF GLFHAVFGVC WFAGSALLGV
LYDTSIPALV GVAVALQVLA ALVLGWMSRQ PKR