Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_0588 |
Symbol | |
ID | 8567222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 667530 |
End bp | 668966 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | O-succinylbenzoate-CoA ligase |
Protein accession | YP_003289876 |
Protein GI | 268316157 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.791941 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGCCGC GTGAGATAAG CTGCCCGCTC TTCCGGTGGA GTCAGGAGAC GCCGGATCGT CCGCTGGTGC GGCTCCCGTC CGGGCCGATC ACGGCGGCCG CGCTGGAGGA ACGGGTCCGG CGTGCAGTTG TGCGTCTGCA GAACGAAGGC GTGGGACCGG GGGATCGGAT CGGGCTCTGG CTGGACGACC CCGTCGCCAC GCTGACGATC CTGCTGGCGC TCTGGCGCCT GCGGGCCGTG GCCTGCCTGC TGAGTACGCG CCTGCCGGAT ATCGGACTCG ACGCGCCGAT CCGCCAGGTC GGTCTGCAGG CATTGATCAC CGATCGGCCG TGCGTGACGA CGTTGCCCTG CTGGCACCCG GAAGCGCTGC AGGACGCTCC GCCGACTGTC CCGAAAGCAC CGCCGCGCCT GACGCTGGAT CAGCACGCCA CCGTCTTTTT TACCTCGGGC AGTACCGGCG TGCCCAAAGG GGTGCTGCAC ACGATCGGCA ACCACCTTTA CAGCGCGCGT GGGGTGGCTG TGCATCTGGA GTTGCGCCGG GGCGATCGCT GGCTGCTGGT GCTGCCGCTT TACCACGTGG GCGGCATGGG CGTGGTCGCT CGTTGTCTGC TGGTCGGTGC CGAGATCGTG ATCCCGGAGC GACGGGCGCC GCTCGGCCGG GCGCTGGTCC GCTATGCGCC CACGCACGCT TCGCTGGTGC ATACGCAACT CTGGCGGCTG CTGCGCGAGA CTGAAAGCCC ACCGCCCTGG ACGCTGCGGG CGGTGCTGCT GGGCGGCAGC GCCATCCCGG AGGAGGTGTT GCAGGAAGGG ACAGCGCGGG GCTGGCCGCT GCATACCAGC TACGGCCTGA CCGAAATGGC TTCGACCGTC ACGGCCACGC CGCCCGGTGC TTCGCTGGAG TTGCTGCGAA CCTCCGGACG TGTGCTGCCC TATCGGGAAC TGAAGATCGG CCCGGACGGG GCCATCCTGG TGCGCGGGCC GGTGCGGTTT GCTGGCTATC TGGAGAACGG CCGGTTGCAC CGACCCTTCG ACGAAGCCGG CTGGTTCGAC ACGGGCGACC TGGGGTGGCT GGACGAGGCG GGCTATTTGC ACGTGGAAGG GCGGCGCGAC AACCGATTCA TCTCCGGCGG CGAAAACATT CAGCCCGAGG CGATCGAACG GGCCCTGCTG CGCCTTCCCG GTATTGCCGA GGCCGTCGTC GTACCCGTGC CTGATCCGGA GTTCGGCGAG CGTCCGGCTG CTTTCGTGCG AACAGAGGGA GAGCGGTGGG AGCCCGACCG CTGGCGGGCG GAGCTGCGCC GGGCGCTGCC GGGCTTCATG GTGCCGGTGG CGTTCTGGCC CTGGCCCGAA TTGCCGGACG GAGGCATCAA GGCGTCTCGA CGGCTCCTGA AAGAAGAAGC CCGGCGGCGG TGGCGGCCGT CGGAAGATAT GGGATAG
|
Protein sequence | MSPREISCPL FRWSQETPDR PLVRLPSGPI TAAALEERVR RAVVRLQNEG VGPGDRIGLW LDDPVATLTI LLALWRLRAV ACLLSTRLPD IGLDAPIRQV GLQALITDRP CVTTLPCWHP EALQDAPPTV PKAPPRLTLD QHATVFFTSG STGVPKGVLH TIGNHLYSAR GVAVHLELRR GDRWLLVLPL YHVGGMGVVA RCLLVGAEIV IPERRAPLGR ALVRYAPTHA SLVHTQLWRL LRETESPPPW TLRAVLLGGS AIPEEVLQEG TARGWPLHTS YGLTEMASTV TATPPGASLE LLRTSGRVLP YRELKIGPDG AILVRGPVRF AGYLENGRLH RPFDEAGWFD TGDLGWLDEA GYLHVEGRRD NRFISGGENI QPEAIERALL RLPGIAEAVV VPVPDPEFGE RPAAFVRTEG ERWEPDRWRA ELRRALPGFM VPVAFWPWPE LPDGGIKASR RLLKEEARRR WRPSEDMG
|
| |