Gene Rmar_0588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0588 
Symbol 
ID8567222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp667530 
End bp668966 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content69% 
IMG OID 
ProductO-succinylbenzoate-CoA ligase 
Protein accessionYP_003289876 
Protein GI268316157 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.791941 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCCGC GTGAGATAAG CTGCCCGCTC TTCCGGTGGA GTCAGGAGAC GCCGGATCGT 
CCGCTGGTGC GGCTCCCGTC CGGGCCGATC ACGGCGGCCG CGCTGGAGGA ACGGGTCCGG
CGTGCAGTTG TGCGTCTGCA GAACGAAGGC GTGGGACCGG GGGATCGGAT CGGGCTCTGG
CTGGACGACC CCGTCGCCAC GCTGACGATC CTGCTGGCGC TCTGGCGCCT GCGGGCCGTG
GCCTGCCTGC TGAGTACGCG CCTGCCGGAT ATCGGACTCG ACGCGCCGAT CCGCCAGGTC
GGTCTGCAGG CATTGATCAC CGATCGGCCG TGCGTGACGA CGTTGCCCTG CTGGCACCCG
GAAGCGCTGC AGGACGCTCC GCCGACTGTC CCGAAAGCAC CGCCGCGCCT GACGCTGGAT
CAGCACGCCA CCGTCTTTTT TACCTCGGGC AGTACCGGCG TGCCCAAAGG GGTGCTGCAC
ACGATCGGCA ACCACCTTTA CAGCGCGCGT GGGGTGGCTG TGCATCTGGA GTTGCGCCGG
GGCGATCGCT GGCTGCTGGT GCTGCCGCTT TACCACGTGG GCGGCATGGG CGTGGTCGCT
CGTTGTCTGC TGGTCGGTGC CGAGATCGTG ATCCCGGAGC GACGGGCGCC GCTCGGCCGG
GCGCTGGTCC GCTATGCGCC CACGCACGCT TCGCTGGTGC ATACGCAACT CTGGCGGCTG
CTGCGCGAGA CTGAAAGCCC ACCGCCCTGG ACGCTGCGGG CGGTGCTGCT GGGCGGCAGC
GCCATCCCGG AGGAGGTGTT GCAGGAAGGG ACAGCGCGGG GCTGGCCGCT GCATACCAGC
TACGGCCTGA CCGAAATGGC TTCGACCGTC ACGGCCACGC CGCCCGGTGC TTCGCTGGAG
TTGCTGCGAA CCTCCGGACG TGTGCTGCCC TATCGGGAAC TGAAGATCGG CCCGGACGGG
GCCATCCTGG TGCGCGGGCC GGTGCGGTTT GCTGGCTATC TGGAGAACGG CCGGTTGCAC
CGACCCTTCG ACGAAGCCGG CTGGTTCGAC ACGGGCGACC TGGGGTGGCT GGACGAGGCG
GGCTATTTGC ACGTGGAAGG GCGGCGCGAC AACCGATTCA TCTCCGGCGG CGAAAACATT
CAGCCCGAGG CGATCGAACG GGCCCTGCTG CGCCTTCCCG GTATTGCCGA GGCCGTCGTC
GTACCCGTGC CTGATCCGGA GTTCGGCGAG CGTCCGGCTG CTTTCGTGCG AACAGAGGGA
GAGCGGTGGG AGCCCGACCG CTGGCGGGCG GAGCTGCGCC GGGCGCTGCC GGGCTTCATG
GTGCCGGTGG CGTTCTGGCC CTGGCCCGAA TTGCCGGACG GAGGCATCAA GGCGTCTCGA
CGGCTCCTGA AAGAAGAAGC CCGGCGGCGG TGGCGGCCGT CGGAAGATAT GGGATAG
 
Protein sequence
MSPREISCPL FRWSQETPDR PLVRLPSGPI TAAALEERVR RAVVRLQNEG VGPGDRIGLW 
LDDPVATLTI LLALWRLRAV ACLLSTRLPD IGLDAPIRQV GLQALITDRP CVTTLPCWHP
EALQDAPPTV PKAPPRLTLD QHATVFFTSG STGVPKGVLH TIGNHLYSAR GVAVHLELRR
GDRWLLVLPL YHVGGMGVVA RCLLVGAEIV IPERRAPLGR ALVRYAPTHA SLVHTQLWRL
LRETESPPPW TLRAVLLGGS AIPEEVLQEG TARGWPLHTS YGLTEMASTV TATPPGASLE
LLRTSGRVLP YRELKIGPDG AILVRGPVRF AGYLENGRLH RPFDEAGWFD TGDLGWLDEA
GYLHVEGRRD NRFISGGENI QPEAIERALL RLPGIAEAVV VPVPDPEFGE RPAAFVRTEG
ERWEPDRWRA ELRRALPGFM VPVAFWPWPE LPDGGIKASR RLLKEEARRR WRPSEDMG