| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_0586 |
|---|
| Symbol | |
|---|
| ID | 8567220 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | + |
|---|
| Start bp | 665495 |
|---|
| End bp | 666457 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | 1,4-dihydroxy-2-naphthoateoctaprenyltransferase |
|---|
| Protein accession | YP_003289874 |
|---|
| Protein GI | 268316155 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0271954 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGGAGG CCGTCCCCGA AAAGCAGGAA GGCAAACGCA TCATGCCGGA CGGATTCGGT
TCGACGGCCT CGGTGCCGGC ACTGCCGCGC TGGCGCGTCT GGGTGCTGGC CGCCCGCCCC
AAGACGCTGG CCGCGGCCGT CGCGCCTGTG CTCATGGGTA CGGCCATGGC CTGGGCCGAC
GGTGGCTTTC ACCTGCCCTC GGCGTTTTTT GCGCTGATCG GCGCGCTGCT GATCCAGATC
GGGACGAACT TCGCCAACGA CTATGCCGAC TACCTGAAGG GCGCCGATAC GGCCACGCGC
AAGGGACCAC TGCGGGTGAC GGCGGCAGGC CTGGTGACGC CCGAGGCCAT GCGACGCGCC
ACCACGCTGA CGTTCGCGCT GGCCGTCGTG GCCGGCCTCT ACCTGATCTG GCGGGGTGGC
TGGCCCGTGC TGGCGATCGG ATTGCTTTCG ATCCTGTTCG GCATCCTGTA CACGAGCGGT
CGCTATGCGC TGGCCTATCT GGGGCTGGGT GAGCTTTTCG TGCTCATCTT TTTCGGGCCG
GTGGCCGTGG GCGGTACCTA TTACGTGCAG ACGCTCACAA TCACGCGCGA AGTGCTGCTG
ATGGGGCTGG CGCCGGGGCT GATTTCGACG GGCATCCTGC TGGTGAACAA CGTCCGGGAC
ATCGAGGAAG ACCGCCAAGC AGGCAAACGG ACGCCCGTGG TGCGCTTCGG ACGGACGTTT
GGCGTGGGAC TGTATGCTTT CTGTCTGTTC AGCGCGCTGC TTCTGCCGGT CGTCTGGTAT
CTGCTCACCT ACCGGCATGG CGGGGCGATG GCGGTGTTGG CGCTGTTGCC GGCCAGCGTG
CGCGCCATCC GGACGCTGGC GCTTGAGCGG GACGGTGCCG TGCTGAACGC GCTCCTGGCG
GCTACCGGAC GCCTGCTCCT GCTCTACAGT CTGCTGTTCT CGATCGGGTG GATTCTGACC
TGA
|
|---|
| Protein sequence | MKEAVPEKQE GKRIMPDGFG STASVPALPR WRVWVLAARP KTLAAAVAPV LMGTAMAWAD
GGFHLPSAFF ALIGALLIQI GTNFANDYAD YLKGADTATR KGPLRVTAAG LVTPEAMRRA
TTLTFALAVV AGLYLIWRGG WPVLAIGLLS ILFGILYTSG RYALAYLGLG ELFVLIFFGP
VAVGGTYYVQ TLTITREVLL MGLAPGLIST GILLVNNVRD IEEDRQAGKR TPVVRFGRTF
GVGLYAFCLF SALLLPVVWY LLTYRHGGAM AVLALLPASV RAIRTLALER DGAVLNALLA
ATGRLLLLYS LLFSIGWILT
|
|---|
| |