Gene Rmar_0541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0541 
Symbol 
ID8567175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp613983 
End bp614684 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content67% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003289830 
Protein GI268316111 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTACAGG TTGCGCATCT GACGAAGACG TACCGGAGCG GCACCCGGAC GCTGACGGTA 
CTCCAGGATG TCTCGTTTTC GGTGGCCGAA GGGGAAATCT GTGCGGTGGT CGGCCCTTCG
GGCAGCGGTA AAACGACGCT GCTGGGGTTG TGTGCCGGAC TGGATCTGCC CACGGCGGGC
AAGGTGTGGC TGGACGGCCA GGACCTGACC GTACTCGACG AAGACGCCCG CGCGGCGCTT
CGCAACCGTT TGGTGGGCTT CGTTTTCCAG ACTTTTCAGC TATTGCCGAC GCTGACCGCG
CTGGAGAACG TCATGGTACC GGCCGAGCTG CGGGGCGACC GCACGGCTCG CCGACGGGCT
ATCGAACTGC TGGAGCGGGT GGGACTGGGC GACCGCCTGC ATCACTATCC GCGCCAGCTC
TCGGGCGGTG AGCAGCAACG GGTGGCGCTG GCACGGGCTT TCATCAACCG TCCCCGCATC
CTGTTCGCCG ACGAGCCGAC CGGCAACCTG GACGCCGAGA CCGGGGCGGT CGTCGAGGAT
CTGCTTTTCG AACTGAACGC GACGGCCGGC ACCACGCTGG TCATCGTCAC GCACAACCTG
GAGCTGGCCC GACGCACCGG CCGCATCCTG CACCTGCGGG CCGGACGCAT CGTGGCCGAC
GAGCCGGTCC ACGCCACCAC CAGTGCGACA CGTCATGGCT GA
 
Protein sequence
MLQVAHLTKT YRSGTRTLTV LQDVSFSVAE GEICAVVGPS GSGKTTLLGL CAGLDLPTAG 
KVWLDGQDLT VLDEDARAAL RNRLVGFVFQ TFQLLPTLTA LENVMVPAEL RGDRTARRRA
IELLERVGLG DRLHHYPRQL SGGEQQRVAL ARAFINRPRI LFADEPTGNL DAETGAVVED
LLFELNATAG TTLVIVTHNL ELARRTGRIL HLRAGRIVAD EPVHATTSAT RHG