Gene Rmar_0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0539 
Symbol 
ID8567173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp612005 
End bp613090 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content63% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003289828 
Protein GI268316109 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.400053 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGTCCCC TCATTCCGCA CCTGCAACAC GACCTTTCGC TTTCTCATGC GGCCGTAGGT 
CTTCTGACGA CGTTACCGTT GCTGGCTTTC GGACTGGGCT CGTTCGGGGC TTCCCGACTG
GCTGCACGGT TTGGAATGGC GCGCGTGCTG CTGCTCTCGA TGGTACTGCT GACCGTAGGG
GAGCTGGTCC GGCCCTTTCC CGCCCCTTTC TACCTGTTTA CCGGAACGTT GCTGGTCGGT
GCTGCTATTG CCGTCAACAA CGTGCTCTTG CCCGCCGTGG TCAAAGAATC GTTCCCGGCC
CGCCTGGGCG TATTGACTGG CCTTTATCTA GCCACCATGC ACCTGATGGC TTCGCTGGCC
TCGGGACTCA GTGTCCCGAT GGCCGAAAGC TGGGGGTTGG GCTGGGAAGG TGCGCTGCGC
TGCTGGGCCC TGCTGGCTTT CGTGGCGGCC CTGCTCTGGA TACCGCCGGC ACGTCGCGCC
CCCATCACAA CGTCTCCAGA ATCAACGCGG CGCACCCTCC CCTGGCGCTC TGCGCTGGCC
TGGCAGGTTA CGCTGTTCAT GGGCCTGCAG TCCTTCTTTT TCTACTGCAT GATCACCTGG
ATCCCTGCCC TGGCGCAAGA TCGTGGTTTT TCTGCCACGA CAGCTGGCTG GATCCTGTTT
GTCTTTCTGC TGGCGCAGCT TCCCCTGCTG TTCATCACGC CCGTGCTGGC CGAGCGACGG
CCGCATCAAC AATCCCTGGC CCTCGCAGCA GGTCTGCTGA CCATAGCCGG TGTGGTCGGC
TTTATGATCG GCAAGGGGGT GGTGCTCTGG AGCGCCGCCA TCCTGGCCGG AGCCGGAGCG
GGCATGGGTT TTTCGCTGGC CATGACGCTC TTTCCTCTGC GCACACGTAC TCCGCTGCGC
GCGGCGGATC TTTCCGCCAT GGCCCAGGCA ATCGGATACC TGCTGGCCGC TGTCGGACCG
ACGGCCTTTG GCTTCCTTTA TGACCAGACG CATCGATTTG CCACGTCTCT GTGGATGCTG
CTGGGCATTA CCCTCCTGAT GCTGGGCTTT GGCGTGGCCG CTTCACGACC GCGCTTCGTC
GATTGA
 
Protein sequence
MGPLIPHLQH DLSLSHAAVG LLTTLPLLAF GLGSFGASRL AARFGMARVL LLSMVLLTVG 
ELVRPFPAPF YLFTGTLLVG AAIAVNNVLL PAVVKESFPA RLGVLTGLYL ATMHLMASLA
SGLSVPMAES WGLGWEGALR CWALLAFVAA LLWIPPARRA PITTSPESTR RTLPWRSALA
WQVTLFMGLQ SFFFYCMITW IPALAQDRGF SATTAGWILF VFLLAQLPLL FITPVLAERR
PHQQSLALAA GLLTIAGVVG FMIGKGVVLW SAAILAGAGA GMGFSLAMTL FPLRTRTPLR
AADLSAMAQA IGYLLAAVGP TAFGFLYDQT HRFATSLWML LGITLLMLGF GVAASRPRFV
D