Gene Rmar_0527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0527 
Symbol 
ID8567161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp597093 
End bp600038 
Gene Length2946 bp 
Protein Length981 aa 
Translation table11 
GC content66% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003289817 
Protein GI268316098 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTCGC AGATGCGCGC GTTGCTTTTG CTGTTGACGG GCCTGCTGCT GATCGAATCG 
GCACCGGCGC AGCCCCTGTC GTCGTACGTG CAGGACACCT GTCCGGACGA CTGCTTTGCT
CTGGCCGAAA ACGGCCGTGT CGTGTCGATC GTGGCGAGCC GGGCCGACGA TCCGGTGGTG
CTCCGGGCCA TCGAGGATCT GGCGGCCGAC CTGGAGCGCG TGACGGGGCG GCGTCCCGTC
GTGCACTACG ACACGTGGCC CGCCGAACCG TCCCTCGTCG TGGGCAGCCT GGCGCACAGC
CCCCTGATTC GGGAACTGGT GGAGACCGGA CAGCTCGCTC CAGGCGAAAT CGAAGGACGC
TGGGAGGCGT TTTTGCTGCA GGTCGTACCC GACGTCCGGG GAGCCGACCG CCTGGTCATC
GCCGGCAGCG ATCCGCGCGG TACGGTTTTC GGCATCTACG ACCTGTCGCG GGCGATGGGC
GTTTCGCCCT GGTACTGGTG GGCCGACGTG CCTGTACCGC ACCGGCCCGC GCTTTACGTG
GCGCGTACGC TTCGCCGCAC GGACTACCCG CGCGTGCGCT ATCGGGGCCT CTTCATCAAC
GACGAAGCGC CCGCGCTTTC GGGCTGGGCC TATGAAAAAT TCGGCGGCTT CAACCACCGT
TTCTACGCGC GCGTTTTCGA GCTGATCTTA CGCCTGAAGG GCAATTTCCT CTGGCCGGCC
ATGTGGGGGC GCTCGCTTTT CGAGGAGGAC AGTCTGAACA TCCCCACGGC CGCCCGCTAC
GGTATCGTGA TCGGCACCTC GCACCACGAG CCCATGCTCC GGGCGCACGT CGAATGGCAA
TGGCACGGTA AAGGTCCCTG GGATTACACG AAAAACGCCG CGACGCTGCA GGCTTTCTGG
CGGGAGGGGA TTCGACGCAT GAAGCACAAC GAGGCGATCG TGACGGTGGG CATGCGGGGC
GACGGCGACG AGCCCATGAG CGAGGAGACG GCCATCGAAC TGCTGGAGCG CATCATCCGC
GACCAGCGGC GGATTCTGGC CGAAGAAACC GGCCGCGATC CCTCCGAAAT CCCCCAGGCC
TGGACCATCT ACAAAGAGGT GCAGGACTAC TACGAAAAGG GAATGCGCGT CCCCGAAGAC
ATTACGATCG TGTTCACCGA CGACAACTGG GGCAACGTAC GCCTGTTGCC GCCGCCCGGT
AGTCCGCCGC GAAAGGGCGG CTACGGCATG TACTACCATT TCGATTATGT GGGGGCGCCG
CGCAGCTACA AATGGATCAA CACGGTGCAG ATTGAGCGCA CCTGGGAGCA GATGCGCCTC
ACCTACCGGC ACGGCGTCGA TCGGATCTGG GTCGTGAACG TGGGCGACAT CAAGCCCATG
GAGCTGCCCC TTACGTTTTT CATGGACATG GCCTGGGATC CGGAGCGCTT CACGGCCGCC
GACCTGCCCC GCTACTACGA ACGCTGGGCC GCCGAACAGT TTGGGCCCCG GTATGCCGCC
GAGATCGCGA CGCTGCTGGC CACCTACACG AAGTACAACG CCCGTCGCAA GCCGGAGCTG
CTCGACGCCG ACACCTACAG CCTGCACCAC TACCGGGAGT TCGCGCGCGT CGTCGCGGAC
TACCGGGCAC TGGCCGCCCG TGCGCAGGCC CTTTTCTCGC GTATGCCCGC CGCCTACCGC
GATGCGTTCT ATCAGCTTGT GGCCTATCCG GTGATGGCCA GCGCCAACCT GTACGAGATG
TACCATGCGC TGGCGCTGAA CCGCCTCTAT GCGCGCCAGC GGCGCGCCGC CACCAACCGG
ATGGCCGAAA AAGTGCGGCG TCTGTTCGCG CGCGACGCCG AACTGGCCGC CTACTACAAC
CACGTGATGG GCGCCGGTCG CTGGAACCAC ATGATGGACC AGCCGCGCAT CGGCTACACG
AGCTGGGACG ACCCGGACGA GAACATCATG CCGGAGATCG AAACGATCGC CGTGCCCGAC
ACGGCCCTGC CGGCCGTGGC CGTCGAGGGA CAGCCCGACA CCTGGCCCGG ACCCGACGTA
CCGGCCGCGC TGCCCGTCTT CGACGATCTG ACCCGCCCGG TGCATTACCT CGAAGTGTTC
AACCGGGGAC GGCAACCGTT CCGCTTTCGT ATTCAGACCG AATCGCCCGG CCTGGCTTTC
TCCGCGACCG AGGGCGAGGT GACCGAGCAG CAGCGCATCC AGGTGACTGT CGACTGGGCG
CAGGTGCCGC CCGGAGCAGC GCAGCTCGTC TTCTACGTGG AAGGGCCGGG CATGCGCGTG
CCCGTCGTAG CCCCGCTGGA ACGGATCGTG GACCGCATAC CGCCGGACTT CGAGGGCTTC
GTGGCGCGTG ACGGACACCT GGCCATCGAG GCCCACCATT TCAGCCGACA GGTGTCGGCT
GGCGAAGCCC GCTGGGAAGT GATCCCCAAC CTGGGACGAA CGGCCTCGGC CGTCACTCCG
CTGCCCGTGA CGATGCGGGC GCAAGCGCCC GGCGCCGACA GCCCGCGTCT GGAATACGAC
GTGCTGCTGC CCGCGCCCGG ACGCATTCGC GTGCACCTTT ACCTGGCGCC TACCTACAAC
TTCGTCAACC GTCCCGGTGG ACTCCGGCTA GCCGTCTCGC TGGACGACGC GCCGCCACAG
CTCCTCGAGG TACACGCCGC CGACACGATC CCCGACTGGC GCTACGGCCG CGTGTGGATG
GACGCCGTCG CCAGCAACGT GCGCATCGTC ACGTCCGAAC ACGAAATCAC CCGACCCGGC
CCCCACACAC TCAAGCTCTG GGCGGTGGAC GGCGGCGTCG TGGTGGAACG GATCGTCATC
GACACGGGCG GGCTGCGCCC GAGTTACCTG GGCCCGCCCG AAAGTCCCTT CGTGCGCAAT
CGCCGCACCC ACTGGCCTCC GGAACCCGAA GCGGGTTCGG CATACCCCGC CCGAGATACC
CGATAG
 
Protein sequence
MLSQMRALLL LLTGLLLIES APAQPLSSYV QDTCPDDCFA LAENGRVVSI VASRADDPVV 
LRAIEDLAAD LERVTGRRPV VHYDTWPAEP SLVVGSLAHS PLIRELVETG QLAPGEIEGR
WEAFLLQVVP DVRGADRLVI AGSDPRGTVF GIYDLSRAMG VSPWYWWADV PVPHRPALYV
ARTLRRTDYP RVRYRGLFIN DEAPALSGWA YEKFGGFNHR FYARVFELIL RLKGNFLWPA
MWGRSLFEED SLNIPTAARY GIVIGTSHHE PMLRAHVEWQ WHGKGPWDYT KNAATLQAFW
REGIRRMKHN EAIVTVGMRG DGDEPMSEET AIELLERIIR DQRRILAEET GRDPSEIPQA
WTIYKEVQDY YEKGMRVPED ITIVFTDDNW GNVRLLPPPG SPPRKGGYGM YYHFDYVGAP
RSYKWINTVQ IERTWEQMRL TYRHGVDRIW VVNVGDIKPM ELPLTFFMDM AWDPERFTAA
DLPRYYERWA AEQFGPRYAA EIATLLATYT KYNARRKPEL LDADTYSLHH YREFARVVAD
YRALAARAQA LFSRMPAAYR DAFYQLVAYP VMASANLYEM YHALALNRLY ARQRRAATNR
MAEKVRRLFA RDAELAAYYN HVMGAGRWNH MMDQPRIGYT SWDDPDENIM PEIETIAVPD
TALPAVAVEG QPDTWPGPDV PAALPVFDDL TRPVHYLEVF NRGRQPFRFR IQTESPGLAF
SATEGEVTEQ QRIQVTVDWA QVPPGAAQLV FYVEGPGMRV PVVAPLERIV DRIPPDFEGF
VARDGHLAIE AHHFSRQVSA GEARWEVIPN LGRTASAVTP LPVTMRAQAP GADSPRLEYD
VLLPAPGRIR VHLYLAPTYN FVNRPGGLRL AVSLDDAPPQ LLEVHAADTI PDWRYGRVWM
DAVASNVRIV TSEHEITRPG PHTLKLWAVD GGVVVERIVI DTGGLRPSYL GPPESPFVRN
RRTHWPPEPE AGSAYPARDT R