Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_0514 |
Symbol | |
ID | 8567148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 578469 |
End bp | 579650 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_003289804 |
Protein GI | 268316085 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.770818 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCGTA TTACGCTGAC AATCCTGGTG CTGATGAGCC TGAGCGCCTG TCGCAGGGCG CCGATCGAAG CGCTGCTTCC GGAAGCGATC GGCGTCCCTC CTTCCCTACA GGCGGATTCC GCTTCGGCAA GTTATCGGGT GGTGCGCCTG GACACGGCCC AGCAGCGCAG GTTGCAGGTA CAGGTGGCTC CGGTGCGCTA CGAGCGCGCC ACGTACACCG TCAGCATTCC CGGCGAAGTC TATCCGGCGC CGGGCCTGAT GGCCCAGGTT TCCACGCCGA TTGATGGCCG GGTAGCCCGG CTGTACGTTC CCGAAGGAGA AGCTGTGCAG CGGGGGCAGG TGCTGTTGGA ACTGGAGAGT CTGGCGTTTG CCGAGCTGGT CTCGGCCTTT TTGCAGGCGC AGGCCGAGGA GGCCTATCTG GCGCGGCAGG TGGCCCGCCT CCGGCAGCTG GTGACCGAGC AGCTCACGCC GCAGAGCACG CTTGACCAGA CCGAGGCCGA TTATCTGCGC GCGCAGGCGC GCCGTCAGGC GGCTGAAGTA CGTCTGCGTG CGCTCGGGGT TACGCCCGAA GTCGCACAGG CGCTGGGGCA ACAGGAACGC CCCCTGCTTC CTCTGCGGGC GCCCATCGAC GGGTACGTGG ACCAGCATCA GGTAGAGCTG GGCCAGGCCG TTAGCGCCAA TCAGACGCTG ATGACGATTG TCGATCCATC GCGGGTGCAC ATCCGGGGAT TTCTGGCCCC CGACGATGCG CTGGGTCTGC AACCGGGCGA TTCCGTTCGG CTGGTGCTTC AGGTCCCCGA TTCGCTGACG CTGGGTGCCC GGGTCCACAC GATTAATCCG GCGCTCGACC CGGAAAACCG GGCCGTGGTC GTCAACATCC TGGCCGATAC CCGTCAGGGC TGGCCGCGAC CCGGGCAAAA CGTCCGGCTA TGGATCCGAT TGCGGACGCC CCGACCGGTC TATGTCGTAC CCCTGGCAGC CCTCACCTAC GACGGCCAGC AGGCCATCGT CTTTGTGCAA CAGGCTCCCG ATACCTACGA GGTGCGTCCC GTGACCGTCT GGCGCACCGA TGCCGCTCAG GCGCTTCTGC TCGAGGGCGT TCGTGAAGGC GAACGCGTGG TCGTTCATCC GGTCTTCAGC CTGAAGGCCC TGATGCGTTA CAGCGAATTT GCCGAAGAGT AA
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Protein sequence | MRRITLTILV LMSLSACRRA PIEALLPEAI GVPPSLQADS ASASYRVVRL DTAQQRRLQV QVAPVRYERA TYTVSIPGEV YPAPGLMAQV STPIDGRVAR LYVPEGEAVQ RGQVLLELES LAFAELVSAF LQAQAEEAYL ARQVARLRQL VTEQLTPQST LDQTEADYLR AQARRQAAEV RLRALGVTPE VAQALGQQER PLLPLRAPID GYVDQHQVEL GQAVSANQTL MTIVDPSRVH IRGFLAPDDA LGLQPGDSVR LVLQVPDSLT LGARVHTINP ALDPENRAVV VNILADTRQG WPRPGQNVRL WIRLRTPRPV YVVPLAALTY DGQQAIVFVQ QAPDTYEVRP VTVWRTDAAQ ALLLEGVREG ERVVVHPVFS LKALMRYSEF AEE
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