Gene Rmar_0514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0514 
Symbol 
ID8567148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp578469 
End bp579650 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content66% 
IMG OID 
Productefflux transporter, RND family, MFP subunit 
Protein accessionYP_003289804 
Protein GI268316085 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.770818 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCGTA TTACGCTGAC AATCCTGGTG CTGATGAGCC TGAGCGCCTG TCGCAGGGCG 
CCGATCGAAG CGCTGCTTCC GGAAGCGATC GGCGTCCCTC CTTCCCTACA GGCGGATTCC
GCTTCGGCAA GTTATCGGGT GGTGCGCCTG GACACGGCCC AGCAGCGCAG GTTGCAGGTA
CAGGTGGCTC CGGTGCGCTA CGAGCGCGCC ACGTACACCG TCAGCATTCC CGGCGAAGTC
TATCCGGCGC CGGGCCTGAT GGCCCAGGTT TCCACGCCGA TTGATGGCCG GGTAGCCCGG
CTGTACGTTC CCGAAGGAGA AGCTGTGCAG CGGGGGCAGG TGCTGTTGGA ACTGGAGAGT
CTGGCGTTTG CCGAGCTGGT CTCGGCCTTT TTGCAGGCGC AGGCCGAGGA GGCCTATCTG
GCGCGGCAGG TGGCCCGCCT CCGGCAGCTG GTGACCGAGC AGCTCACGCC GCAGAGCACG
CTTGACCAGA CCGAGGCCGA TTATCTGCGC GCGCAGGCGC GCCGTCAGGC GGCTGAAGTA
CGTCTGCGTG CGCTCGGGGT TACGCCCGAA GTCGCACAGG CGCTGGGGCA ACAGGAACGC
CCCCTGCTTC CTCTGCGGGC GCCCATCGAC GGGTACGTGG ACCAGCATCA GGTAGAGCTG
GGCCAGGCCG TTAGCGCCAA TCAGACGCTG ATGACGATTG TCGATCCATC GCGGGTGCAC
ATCCGGGGAT TTCTGGCCCC CGACGATGCG CTGGGTCTGC AACCGGGCGA TTCCGTTCGG
CTGGTGCTTC AGGTCCCCGA TTCGCTGACG CTGGGTGCCC GGGTCCACAC GATTAATCCG
GCGCTCGACC CGGAAAACCG GGCCGTGGTC GTCAACATCC TGGCCGATAC CCGTCAGGGC
TGGCCGCGAC CCGGGCAAAA CGTCCGGCTA TGGATCCGAT TGCGGACGCC CCGACCGGTC
TATGTCGTAC CCCTGGCAGC CCTCACCTAC GACGGCCAGC AGGCCATCGT CTTTGTGCAA
CAGGCTCCCG ATACCTACGA GGTGCGTCCC GTGACCGTCT GGCGCACCGA TGCCGCTCAG
GCGCTTCTGC TCGAGGGCGT TCGTGAAGGC GAACGCGTGG TCGTTCATCC GGTCTTCAGC
CTGAAGGCCC TGATGCGTTA CAGCGAATTT GCCGAAGAGT AA
 
Protein sequence
MRRITLTILV LMSLSACRRA PIEALLPEAI GVPPSLQADS ASASYRVVRL DTAQQRRLQV 
QVAPVRYERA TYTVSIPGEV YPAPGLMAQV STPIDGRVAR LYVPEGEAVQ RGQVLLELES
LAFAELVSAF LQAQAEEAYL ARQVARLRQL VTEQLTPQST LDQTEADYLR AQARRQAAEV
RLRALGVTPE VAQALGQQER PLLPLRAPID GYVDQHQVEL GQAVSANQTL MTIVDPSRVH
IRGFLAPDDA LGLQPGDSVR LVLQVPDSLT LGARVHTINP ALDPENRAVV VNILADTRQG
WPRPGQNVRL WIRLRTPRPV YVVPLAALTY DGQQAIVFVQ QAPDTYEVRP VTVWRTDAAQ
ALLLEGVREG ERVVVHPVFS LKALMRYSEF AEE