Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_0508 |
Symbol | |
ID | 8567142 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | - |
Start bp | 571721 |
End bp | 573208 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | transcriptional regulator, NifA subfamily, Fis Family |
Protein accession | YP_003289798 |
Protein GI | 268316079 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTGCTT CGCCCACGCG GACCTCGCTG GATGCGCTCG TCGAAATCGC CCAGACGATC AATACGCTCC GGGATCCGGA AGCCGTGCTG GAAAAGGTGC TGGAGATCGC CATGGAGACG CTCGAAGCCG AGCGCGGCTT CATTCTGCTG AAGGCACCGC AGCACCCGGA AGGGTTCGCC ATCCGGAGCC AGCGCAACTT TACCGATCAG CAACTGGGCG AACTGGTCCG CATTTCGACC AGCGTCGTGC ACGAAGTGCT GCGCCGGGGC GAGCCCGTGC TTGTCTATGA AGCGCAACAG GACGAACGCT ACGGGAAGGC CGAAAGCATC GTGCTGCAAC GCATCCAGTC GATCGCCTGC GTGCCGCTGC GCATCAAGGA ACGACTGATC GGCGCCATCT ACCTCGACAG CCTTTCCCAG CGTGGTCGCT TCACGCGCGA CAATCTGCCG TTTCTGGAAG CCTTCGCCCA CCAGGCGGCC ATCGCCATCG AAAACGCCCA GCTCTACCAG GCCCTGCGCG AGGAAAACCG GCGGCTGCGC AGCGAAATCC AGCGCCTGCA CGGCTTCGAC GAAATCGTCG GCCAGAGCCC GGCCATGCGC GAGGTGTTCG ATACGATGGC CCGCGTGCTC GACACCGACG CCACCGTGCT CATCGAGGGC GAAAGCGGCA CCGGCAAAGA ACTCATCGCC CGCGCCATCC ACTACAACAG CGAGCGGAAA GACAAACCGT TCGTGGTGGT CTTCTGCGGT TCGCTGCCCG ATGAACTCCT GGAAAGCGAA CTCTTTGGCT ACAAGAAGGG TGCCTTCACC GGAGCCCTGT CCGACAAAAA AGGCCTTTTC GAGGTGGCCG ACGGCGGCAC GGTCTTCCTG GACGAAGTCG GCGACCTGAG CCCGCGCATG CAGACGGCCC TGCTGCGCGT GCTGCAGGAA GGCGAGATTC GACGTGTAGG CGACACCCAG GTGCGCAAGG TGGACGTCCG GGTCATCTCG GCCACAAACA AACCGCTGCG CGAGCTGGTC CAGCAGGGCA AGTTCCGCGA AGACCTCTAC TACCGCCTCA ATACGATTCA GATCACGGTA CCGCCGCTGC GGCATCGGCG TGGCGACATC CCGCTGCTGG CCCATCACTT TCTGGACAAA TACGCCGTCA AAAAACGCGC GCACATCAAG GGCTTCACGC CGGAAGCACT CGAGCTGCTG GAGCGCTACC ACTGGCCGGG CAACGTCCGC GAACTGGAAA ACACGATCGA GCGGGCCGTC GTGCTGGCGC GGGGCGAACT GATCACGCCG GAAGACCTGC GCCTGCCCGA CACGGACGGG GCCGATCCCT TCGAACCCGA TCTGCCGCTG AAGGAAGTCG AGCGCCGCGT GGTGCTGCGC ACGTTGAAAC GACACGGCGG CAACATTTCG GAGACGGCGC GCGTGCTGGG CGTATCGCGT CGCTGGCTGC ACTATAAACT GAAAGAATGG GACGTCCAGA ACGCATAG
|
Protein sequence | MSASPTRTSL DALVEIAQTI NTLRDPEAVL EKVLEIAMET LEAERGFILL KAPQHPEGFA IRSQRNFTDQ QLGELVRIST SVVHEVLRRG EPVLVYEAQQ DERYGKAESI VLQRIQSIAC VPLRIKERLI GAIYLDSLSQ RGRFTRDNLP FLEAFAHQAA IAIENAQLYQ ALREENRRLR SEIQRLHGFD EIVGQSPAMR EVFDTMARVL DTDATVLIEG ESGTGKELIA RAIHYNSERK DKPFVVVFCG SLPDELLESE LFGYKKGAFT GALSDKKGLF EVADGGTVFL DEVGDLSPRM QTALLRVLQE GEIRRVGDTQ VRKVDVRVIS ATNKPLRELV QQGKFREDLY YRLNTIQITV PPLRHRRGDI PLLAHHFLDK YAVKKRAHIK GFTPEALELL ERYHWPGNVR ELENTIERAV VLARGELITP EDLRLPDTDG ADPFEPDLPL KEVERRVVLR TLKRHGGNIS ETARVLGVSR RWLHYKLKEW DVQNA
|
| |