| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_0502 |
|---|
| Symbol | |
|---|
| ID | 8567136 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | - |
|---|
| Start bp | 561507 |
|---|
| End bp | 562790 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | mannosyl-3-phosphoglycerate synthase |
|---|
| Protein accession | YP_003289792 |
|---|
| Protein GI | 268316073 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATCG AAATACCACG AGAAGCCGAA CGGTTCGGCG CCAATCACAT CTACGGCGTG
CAGAAGGTCT ATGAACTGGA CTCCGGTCTG CGCCAGGATG CGCCGGCTTC GGAAAACAGT
GTGATTCAGA ACCTTCCCTA CGAGACGCTT TACGAAATCG AACGCGACAT GGCCATCGTC
GTCCCCATCC GGGACGAACG GCTCAAACTG CTGGAAGGCG TGCTGTTCGG CATTCCCCAT
CAGTGCACGG TGATCATCGT GTCGAACAGC CGTCGCGCGC CGGTCGATCG CTTCAAGATG
GAGCAGGACG CCGTCGAGAC CTGGTCGCGC TTCACCCAGA AGCAGCTGCT GCTCGTCCAT
CAGAAAGATC CTTTCATCGC CCGCGCGCTG GCCGAAGCCG GCTATCCGTA CATCCTGGAC
GAAAACGACC TGGTGGCCAA CGGCAAGGCC GAGGGCATGA TCATGGCCAC GCTCCTGGCG
CGCATTCTGG GCAAGCGTTA CATCGGGTTC ATCGACGCGG ACAACTACTT CCCGGGCGCG
GTCTACGAGT ACGTGCACGA GTACGCGGCC GGCTTTGCGC TGAGCAAGTC GCCCTACACG
ATGGTTCGCA TCGCCTGGCA CAGCAAGCCC AAGGTGGTCC AGTCGCAGCT TTTCTTTGCC
AAGTACGGTC GCACGTCGGT GGTGACCAAC CGCTTCCTGA ACCAGCTCAT CAGCTACTAC
ACGGGCTTCG AAACCGAGGT GATTCGCACG GGTAACGCGG GCGAGCACGC CATGACCATG
GAACTGGCGA TGCTCCTGGA CTATGCGACG GGCTATGCCA TCGAGCCCTA TCACTACATC
GATCTGCTGG AAAAGTACGG CGGCGTAATC GAAAGCGCCC ATCCCGAAGT GATGCAGCAT
CAGGTCAACG TCTTTCAGAT CGAATCGCGT AACCCACACC TGCACGAGTC GAAAGGCGAA
GAGCACATCG ACGACATGAT TCTCTCGTCG CTGCAGGTGA TCTACCACTC CAAGATCTGT
CCGGAGCCCA TCAAGCGCGA GGTGTTGCGC GAGCTGTATC GCCGGGGCAT TCTGTCGAAG
GGTGAAGAGC CGGCGCCGCC TCGCATCTAT CCGGCCTTGC TACACGTGGA TCTGGAGGCG
TTCCGCAATG CGCTGATGCG GGCCCCCTAT GGCGAGCAAC TGGAAACGCT GGCCCAGCGG
CGAGGCTATC GCCGCCGACT GCCCCGACCG ACGGTCACAC CGCCCGAAGG TGACGGCTCC
GAACAGGTCG CCACGCCCGC ATGA
|
|---|
| Protein sequence | MRIEIPREAE RFGANHIYGV QKVYELDSGL RQDAPASENS VIQNLPYETL YEIERDMAIV
VPIRDERLKL LEGVLFGIPH QCTVIIVSNS RRAPVDRFKM EQDAVETWSR FTQKQLLLVH
QKDPFIARAL AEAGYPYILD ENDLVANGKA EGMIMATLLA RILGKRYIGF IDADNYFPGA
VYEYVHEYAA GFALSKSPYT MVRIAWHSKP KVVQSQLFFA KYGRTSVVTN RFLNQLISYY
TGFETEVIRT GNAGEHAMTM ELAMLLDYAT GYAIEPYHYI DLLEKYGGVI ESAHPEVMQH
QVNVFQIESR NPHLHESKGE EHIDDMILSS LQVIYHSKIC PEPIKREVLR ELYRRGILSK
GEEPAPPRIY PALLHVDLEA FRNALMRAPY GEQLETLAQR RGYRRRLPRP TVTPPEGDGS
EQVATPA
|
|---|
| |