Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_0486 |
Symbol | |
ID | 8567120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 538341 |
End bp | 539234 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | CRISPR-associated protein Cas1 |
Protein accession | YP_003289776 |
Protein GI | 268316057 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0583925 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTTTTCA AAGGACGCCT CGGACTCGAA TCGGCGCGGG TGCCGCAGGC CGACCGGCAC GGACTGCTGT GGCTGGAGCG GGGCCGCCTG AGCGCCGAAG ACGGAACGCT GGTGTTCACC ACGGCCGGTA CCGATCGGCT GGCCGCCGGC ACCTACGACA TTCCGCTGCA GCAGGTCTCC AACATCCTGC TCGGACCGGG CACCGTCGTC AGCCACGATG CGCTGCGCCT GCTGGCCCGT CAGCAGACCG GGTTGCTGGC GGTCGGCTCC GGTGGGGTAC GGCTTTATGC CGTCAGCATG CCGTTTGGCC CCGACCGTTC GGAGCGGGCA CGTCGGCATG CCCGTCTCTG GGCCGACGAA ACGCGCCGGC TGGAGATTGC CCGCGCCATG TACGCCATCC GGCTGGGCGG AGCGTTGCCA CCGTACATTC AGGATCTGGA CACGTTGCGC GGAATCGAAG GGGCACGCGT CAAAGAAAGC TATCGGCAGC TTGCGCGGCA GTTCGGCATT GACTGGCGGG GCCGTCGGTA CGATCGCCAG CATCCTGAAC TCAACGATCT GGTCAACAAC GCGATCAACC ATGCAGCCGT TGCCGTTTAC GCGGCCGCCC GGATTGCCGT GGCCGTAACC GGCACCATCC CACAGCTCGG CTTCATCCAT GAGGCCTCCG GCCATGCCTT TGCGCTGGAC ATTGCCGATC TGTTTCGAAC CACGGTCACC GTACCGGTGG CTTTTCGTGC GGTGCGTCAG TTCATCACGG AGGGCGGGCG CGACATCGAA TCGGTGACCC GGACGCTGGC CGGGCGCACG CTGCGGGACG AGGAGGTCAT TCCACGCATG ATTGACTACA TCAAGGAACT GATCGATGGC CATGACGATC GCCGTGACCC GTAA
|
Protein sequence | MVFKGRLGLE SARVPQADRH GLLWLERGRL SAEDGTLVFT TAGTDRLAAG TYDIPLQQVS NILLGPGTVV SHDALRLLAR QQTGLLAVGS GGVRLYAVSM PFGPDRSERA RRHARLWADE TRRLEIARAM YAIRLGGALP PYIQDLDTLR GIEGARVKES YRQLARQFGI DWRGRRYDRQ HPELNDLVNN AINHAAVAVY AAARIAVAVT GTIPQLGFIH EASGHAFALD IADLFRTTVT VPVAFRAVRQ FITEGGRDIE SVTRTLAGRT LRDEEVIPRM IDYIKELIDG HDDRRDP
|
| |