| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_0483 |
|---|
| Symbol | |
|---|
| ID | 8567117 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | + |
|---|
| Start bp | 535507 |
|---|
| End bp | 536778 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | CRISPR-associated protein, Cse4 family |
|---|
| Protein accession | YP_003289773 |
|---|
| Protein GI | 268316054 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.797503 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTATCCG CATTCGTTCA GATCCACACG CTGACGGCGT ATCCCGCCGC GCTGCTCAAC
CGGGACGACG CCGGATTCGC CAAGCGCCTG CCCTTCGGCG GGGCTATTCG TACCCGTGTT
TCGTCCCAGT GCCTGAAGTA TCACTGGCGC AATTTTTCGG GCGAGCATGC CCTCTACGGA
CTGGATGTGC CCCGTTCGCT TCGTTCGCGC GAGACGTTCA AACGATGCAT TGCCCGGCCG
CTCGTCGAGG AAGGGTATCC GTTGCGGCTG GTGGTAGCCT TCGCGCTGCA TCTGCAGAAG
CTGATCGTTT CGGACGAGTC GTTGAGCAAA ACCGATTTCA AGAAGCTGAT GAGCGATGAG
GTGGACGATG CGACGTTGCT GGACCAGCTC AAATCAAACC AGGTCATCAT CCTGGGCCGT
CCCGAAGTCG ATTACCTGAC TCGGCGCATC CGGGAGCGGC TGGATGCCCT GCGCGAGGTA
TGGGCGGATG CCGCGGCGCC GCTTTCCGAC GAGCAGCTGG AACGGGTATA TCAGGAGCTG
CAGGCCATCG GCAAGGGGGA GCTGAAAAAG AATCTCAAAG GGCTGTATCT GGCGGCCGGG
CTGGACGCAG CCCTGTTCGG GCGCATGGCG ACCAGCGACG TGCTGGCCCG GGGCGATGCC
GCCATCCACG TGGCGCATGC CTTCACGACG CACGCGGAAG AAAGCGAAAG CGACTACTTT
ACGGCGGTGG ACGAACTGGT CGCGCAGGAA GGGGAAGGCG AGCTGGGCAG CGGGCACCTC
AACAACCAGG AGTTGACGAG CGGCCTGTTT TATGGCTACG TGGTGGTGGA CGTGCCGCTG
CTGGTTTCGA ACCTGGAAGG CGTGCCGCCG GCGGCCTGGC AGGAGGCCGA TCGTACGCTG
GCCGCCGAAG TCGTCAGGCG GTTGCTGCAC CTGATCGCCA CGGTCTCGCC GGGCGCCAAG
CTGGGTTCGA CGGCACCCCA CGCTTACGCT CAGTTTATGC TGGTGGAGTG GGGCCGATCC
CAGCCGCGCA CCCTGGCCAA CGCCTTCCAC CGACCGGTAT CGCTGGACGG CGAGGGCGTG
CTCGTCAACA GCTACCGCGC CCTCGGCCGT TACGTCGAGC AGATGGACCG GATGTACGGC
AAGCTGACGG AGCGCCGACT GGCGGCCATC GACCTGCCCG AAGCGGTGCA ACGCCAGCTT
CAGGTGGACA CGCTCAATGC CGTGCCGGAG ATTGCCGACT GGGTTGCTGA AAAAATCCAG
GGAGGGGCAT GA
|
|---|
| Protein sequence | MVSAFVQIHT LTAYPAALLN RDDAGFAKRL PFGGAIRTRV SSQCLKYHWR NFSGEHALYG
LDVPRSLRSR ETFKRCIARP LVEEGYPLRL VVAFALHLQK LIVSDESLSK TDFKKLMSDE
VDDATLLDQL KSNQVIILGR PEVDYLTRRI RERLDALREV WADAAAPLSD EQLERVYQEL
QAIGKGELKK NLKGLYLAAG LDAALFGRMA TSDVLARGDA AIHVAHAFTT HAEESESDYF
TAVDELVAQE GEGELGSGHL NNQELTSGLF YGYVVVDVPL LVSNLEGVPP AAWQEADRTL
AAEVVRRLLH LIATVSPGAK LGSTAPHAYA QFMLVEWGRS QPRTLANAFH RPVSLDGEGV
LVNSYRALGR YVEQMDRMYG KLTERRLAAI DLPEAVQRQL QVDTLNAVPE IADWVAEKIQ
GGA
|
|---|
| |