Gene Rmar_0472 details

Gene Information

• Locus tag: Rmar_0472
• ID: 8567106
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: +
• Start bp: 518649
• End bp: 520697
• Gene Length: 2049 bp
• Protein Length: 682 aa
• Translation table: 11
• GC content: 67%
• Product: transketolase
• Protein accession: YP_003289762
• Protein GI: 268316043

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGGAAC AGAAGGCGAC GGAGGCGATT CGGGAAACCG ACTTTTCGCC GGGTGAACTG 
GACAATCTGT GCATCAATAC GATTCGATTT CTGGCCGTCG ATGCCGTCGA GCAGGCGAAG 
TCCGGCCATC CAGGCATGCC GATGGGCGCG GCGCCAATGG CCTACGTGCT CTGGACCCGG 
CATCTGCGGC ACAATCCGCG CGATCCGAAG TGGCCGAACC GGGATCGGTT CGTGCTTTCG 
GCCGGTCATG GCTCGATGTT GCTCTACGCG CTGCTGCACC TGACCGGCTA CGACCTGCCC 
ATGGAGGAGT TGCAGCGCTT TCGTCAGTGG GGATCGCGCA CGCCGGGCCA TCCGGAATAC 
GGGTTAACGC CCGGGGTCGA GACCACGACG GGACCGCTGG GCCAGGGCTT CGGAAATGCC 
GTCGGGATGG CGATCGCCGA GCAGTATCTG GCGGCGCATT TCAACCGGGA CGGATTCCCG 
CTGTTCGACC ATTTCACGTA CGTGATCGCC TCCGACGGCG ATCTGATGGA GGGCATCTCG 
CACGAGGCGG CTTCGCTGGC CGGACATCTC GGGCTGGGGA AGTTGATCGT GCTCTACGAT 
GACAACGACA TTTCCATCGA CGGCTCGACG GACATCACCT TCACCGAGGA CGTCGGCGCG 
CGCTTTGAGG CCTACGGCTG GCATGTGCAG CGCGTGGACG ACGGGAACGA CCTGGTAGCC 
ATCGATGCGG CGCTTCGGCA GGCCAAAGCC GAGACCGAAC GCCCTTCGCT CATCATCGTG 
CGCACGCACA TCGGCTACGG AAGCCCGAAC AAGCAGGACA CGCCCGCCGC GCACGGCGCG 
CCGCTCGGAC CCGAAGAGGT GCGCCTGACC AAGCGCAACC TGGGCTGGCC CGAGGACAGG 
ACCTTCTACG TGCCGGACGA AGTCTACCGG CACATGCGGC AGGCCGTCAC GCGGGGGCAG 
CAGTGGCAGG CCGAATGGGA GGCGCTGCGC GCCCGCTATC GGGAGGCCTA TCCCGCCGAA 
GCCGCTGAAC TGGACCGCTG GCTGAGCCGG CGGTTGCCCG AAGGGTGGAG CGAGGGACTC 
CCGACCTTCG AGGCGGGCAA GGCCGTGGCC ACGCGTAATG CCGGCGGCGC CGTGCTCGAC 
GTACTGGCCG CCCGTATTCC CGAGCTGATC GGCGGCTCGG CCGACCTGGC CGAGTCGAAC 
AAGACGCATC CGAAAGGGCG CGAGGCCTTC AGCCGCGACA ACCGCAAGGG CGGCTACATC 
CATTTCGGGG TGCGCGAGCA TGCCATGGCG GCCATCTGCA ACGGGCTGTC GCTGCACGGA 
CTGCGGGCCT ACGCGAGCAC CTTTCTGGTC TTCAGCGATT ATCTGCGGCC GTCGCTGCGG 
CTGAGCGCCC TCATGGAGCA GCCGGTCATC TACGTGTTCA CGCACGACTC GATCGGGCTG 
GGCGAGGACG GGCCCACGCA TCAGCCGATC GAGCATCTGG CCAGCCTGCG CGCCATCCCG 
CACGTGGTGG TGCTGCGGCC GGCCGACGCG ACCGAGACGG TGGAAGCCTG GAAGGTGGCG 
CTCGAGCGCG AGGACGGTCC CACGGTGCTC GTACTGACAC GTCAGAACGT GCCGGTGCTG 
GACCGGAGCC GCCTGGCACC GGCCGATGGG GTGCGCCGTG GCGCTTACGT GCTCAAAGAA 
GCACAGGGCG CGCTGCAGGC GATCCTGCTG GCTTCGGGCA GTGAAGTGCA TGTGGCGCTG 
GCGGCCGCCG AACAGCTCGA AGCCGAAGGC ATCGGCACGC GCGTCGTCAG CGTGCCTTCC 
TGGGAGCTGT TCAAAAAGCA GGAGGCGGCC TATCGGGAAT CGGTACTCCC GCCGGAGGTG 
ACCGTGCGGG TGGCCGTCGA AGCCGGGGTC GGACAGGGAT GGGAGCAGTT CGTGGGGTGC 
CGGGGCCGCA TCGTCAGCAT CGAGCGCTTC GGCGCTTCGG CCCCCGGCAA GGTCCTGTTC 
GAAAAATTCG GCTTCACGCC CGAGCGGGTG GCCAGTGAAG TGCGTGCGCT GCTGGCGCAG 
AACCATTGA 

 

Protein sequence

MQEQKATEAI RETDFSPGEL DNLCINTIRF LAVDAVEQAK SGHPGMPMGA APMAYVLWTR 
HLRHNPRDPK WPNRDRFVLS AGHGSMLLYA LLHLTGYDLP MEELQRFRQW GSRTPGHPEY 
GLTPGVETTT GPLGQGFGNA VGMAIAEQYL AAHFNRDGFP LFDHFTYVIA SDGDLMEGIS 
HEAASLAGHL GLGKLIVLYD DNDISIDGST DITFTEDVGA RFEAYGWHVQ RVDDGNDLVA 
IDAALRQAKA ETERPSLIIV RTHIGYGSPN KQDTPAAHGA PLGPEEVRLT KRNLGWPEDR 
TFYVPDEVYR HMRQAVTRGQ QWQAEWEALR ARYREAYPAE AAELDRWLSR RLPEGWSEGL 
PTFEAGKAVA TRNAGGAVLD VLAARIPELI GGSADLAESN KTHPKGREAF SRDNRKGGYI 
HFGVREHAMA AICNGLSLHG LRAYASTFLV FSDYLRPSLR LSALMEQPVI YVFTHDSIGL 
GEDGPTHQPI EHLASLRAIP HVVVLRPADA TETVEAWKVA LEREDGPTVL VLTRQNVPVL 
DRSRLAPADG VRRGAYVLKE AQGALQAILL ASGSEVHVAL AAAEQLEAEG IGTRVVSVPS 
WELFKKQEAA YRESVLPPEV TVRVAVEAGV GQGWEQFVGC RGRIVSIERF GASAPGKVLF 
EKFGFTPERV ASEVRALLAQ NH