Gene Rmar_0453 details

Gene Information

• Locus tag: Rmar_0453
• ID: 8567087
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: +
• Start bp: 496567
• End bp: 498612
• Gene Length: 2046 bp
• Protein Length: 681 aa
• Translation table: 11
• GC content: 66%
• Product: UvrD/REP helicase
• Protein accession: YP_003289743
• Protein GI: 268316024

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.611277
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGCGCC GCTTTGTACT GAAGCCGGAA GCCGAAGCCC CCACCACCCG CCTGACCGTG 
GACTATGCCG GCCAGCTCAA CCCGCAGCAG TATGCGGTGG TGACGGCCGG GGGCGGACCG 
ATCCTGGTGG TGGCCGGGGC CGGCACGGGC AAGACGCGCA CGCTGGTCTA CCGCGTGGCC 
TATCTGGTCG AGACCGGCAC ACCGCCCGAG GAAATCGTGC TGCTGACCTT CACGCGCCGC 
GCCGCCCGCG AAATGCTGGC GCGGGCCGCC GCGCTGCTCG ACGGACGCTG CGAGCGGGTC 
CAGGGCGGCA CCTTCCACGC CTTCTGCCTG GGACTGCTCC GACGCTATGC CGGCCGGCTG 
GGCTACCCCT CGAACTTCAC CGTGCTGGAC GCTTCGGACG CCGCCGACGT GATCGATCTG 
CTCCGCACCG CACACGGATT GCATCGGAGC GGCCGTCGCT TTCCCCGCAA ACAGACGATC 
CAGGCCATCT TTTCGGCGGC GGCCAGCCAC CCCGACGCCG ATCTGGAAAC GATCCTGGAG 
GCCCGCTATC CGCAGTTTCT GGAGCATCTC GAAGCGTTGC AGGCGCTCCG CGAGGACTAT 
GCCTGCTACA AGCGCCAGCA TGGCCTGATG GACTACGACG ACCTGCTGGC CTGCACGATC 
GAACTCTTCC GGCAGCACCC CGACGTGCAT CGCCAGGTAG CGGCGCGGTG CCGCCATGTG 
CTCGTCGATG AGTACCAGGA CACCAACCGC CTGCAGGCAC AGATCGTGCA GGCGCTGGCC 
GCCGTGCACG GCAACGTGAT GGCCGTGGGC GACGACGCGC AGTCGATCTA CCGCTTCCGC 
GGTGCCGACT TCCGCAACAT CTTCGAGTTT CCCCGGCTGT TTCCGGGCAC GCGTATCCTG 
AAACTGGAGC AGAACTACCG CTCCACGCAG CCTATTCTGG ATCTGGCCAA CCGGATCATC 
CGGCGGGCGC ACCACCGCTA CGACAAGGTG CTCTTCAGCG AGCGCAAGCA GGGCGAGCGG 
CCGGCCATCG TCCCGGCACC GGACGAGCGC ACCGAAAGCC GCTTCGTCTG TCAGATGATT 
CTGGCACTTC GCGAGCAGGG CGTGCCGCTG CATCAGATGG CCGTGCTGTT CCGGAGCAGC 
CATAATGCGT TCGATCTGGA AATGGAGCTC AACCGCCGGG GCATCCCCTA CGTGAAGTAC 
GGCGGGCTGA AGCTCAGCGA AGCGGCCCAT GTAAAGGACC TGCTGGCCTA CCTCCGGCTG 
CTCGAAAATC CGAAAGACGC AGCCGCCTGG AACCGCGTGC TGCAATTGAT CGAAGGGATC 
GGCCCGCGCA CGGCGCAGCG ACTGATCGAA TGGATCACGT CGGCCGACGC GACGCCGTTC 
ACGCTGGAGG AGCGGCCGTT TTCGCCGCGC TACGCCGAGG CGCTGATCCG GCTCTTCACG 
CTGCTGCGCC AGCTCTGGGA GACCGAGCTT CCGCTGGAGG CGCAGCTGAC CGAGCTGTTG 
CACTACTACC GGCCGCTGTG CGAGCGCCGT TACTACGAGG ACTACCCGAA GCGGCTGCAG 
GACCTGGAGC ACCTGGTCAG TCTGAGCGCC CGCTTTCAGA GCCGGGCGGC GTTTCTGGAA 
GCACTCGTGC TCGATCCGCT GGAACTGACC GCGCTGGAGG TCGAGCCGCT CGTCGAAGAC 
GAACCGCCGC TGGTGCTCTC GACGATCCAT TCGGCCAAGG GCCTGGAGTT CCACACGGTG 
TTCATCATCC ACGCGCTGGA AGGCATTCTG CCGTCGGCCT ATGCGCTGAA CGATCCAGAA 
GCGCTTGACG AGGAGCTCCG GCTGCTCTAC GTGGCCGTCA CCCGCGCGCG GGAGTATCTG 
TTCATTTCCT ATCCGATGGT GCGTTACCAG GCCGGCTCCG GCTCGTACCT GACCAGCCCC 
AGCCGCTTTC TGGAAGACCT GCCGGAAGAA ATTCTGGAGC CCTGGGTGCT CGTGGAGGAA 
CCCACGGCTT CTTCCGCCTA TGAACTGCCG GATTCAGGTG CGTCCGCGTT ACCGCCAGGC 
GATTGA 

 

Protein sequence

MARRFVLKPE AEAPTTRLTV DYAGQLNPQQ YAVVTAGGGP ILVVAGAGTG KTRTLVYRVA 
YLVETGTPPE EIVLLTFTRR AAREMLARAA ALLDGRCERV QGGTFHAFCL GLLRRYAGRL 
GYPSNFTVLD ASDAADVIDL LRTAHGLHRS GRRFPRKQTI QAIFSAAASH PDADLETILE 
ARYPQFLEHL EALQALREDY ACYKRQHGLM DYDDLLACTI ELFRQHPDVH RQVAARCRHV 
LVDEYQDTNR LQAQIVQALA AVHGNVMAVG DDAQSIYRFR GADFRNIFEF PRLFPGTRIL 
KLEQNYRSTQ PILDLANRII RRAHHRYDKV LFSERKQGER PAIVPAPDER TESRFVCQMI 
LALREQGVPL HQMAVLFRSS HNAFDLEMEL NRRGIPYVKY GGLKLSEAAH VKDLLAYLRL 
LENPKDAAAW NRVLQLIEGI GPRTAQRLIE WITSADATPF TLEERPFSPR YAEALIRLFT 
LLRQLWETEL PLEAQLTELL HYYRPLCERR YYEDYPKRLQ DLEHLVSLSA RFQSRAAFLE 
ALVLDPLELT ALEVEPLVED EPPLVLSTIH SAKGLEFHTV FIIHALEGIL PSAYALNDPE 
ALDEELRLLY VAVTRAREYL FISYPMVRYQ AGSGSYLTSP SRFLEDLPEE ILEPWVLVEE 
PTASSAYELP DSGASALPPG D