Gene Rmar_0446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0446 
Symbol 
ID8567080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand- 
Start bp489507 
End bp490229 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content64% 
IMG OID 
ProductHAD-superfamily hydrolase, subfamily IA, variant 1 
Protein accessionYP_003289736 
Protein GI268316017 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCTCTT TGAAAAACCC CTCTGAAACG ATCCGCTTCG TCTACTTCGA CCTGGACGAT 
ACGCTGCTCG ACCATCGGAC GGCCGAGCAG GCGGCCCTGG CCGACGTGAA GGCCGCCTTT 
CCGGACGTGT TTGCGCACGT GCCGCTGGAG CAGCTGCACC ACACCTACCA CACAATCAAC 
GTTGACCTCT GGGAGCAATA TCAGCGGGGC CAGATCGACC GCCCGGCGTT GATGCACGCC 
CGCTTTGCGC GGCTGATCGA AGCGCTCGGG CTGCAGGGCG TCACGCCGGA GCAGCTCAAC 
GCCTGTTACA TGGAGCGCTA CCGCCGACAC TGGCGCTGGG TGCCGGGCGC CCGTGAGGCA 
TTTCTGACGG TGGCCCGCCA CCTGCCCGTG GGTATTCTGA CAAACGGCTT TGCCGCCGTG 
CAGTATGCCA AAATGGAGCG CTTTCCGGAG CTGCGTCAGC ATGCAAAGGC GCTGGTCATC 
AGCGAAGAAG TGGGTGTGGC CAAGCCCCAT CCAGAACTGT TCGCCCATGC CACCCGCGCG 
GCCGGTGTCG CGCCGGAAGC GATCCTCTAC GTCGGCGATT CGTTCGGAAG CGACGTGCTC 
GGTGCAAAAA ACGCCGGCTG GCAGGTGGCC TGGTTCACGC CTGCCGCGCC GGCGTCCACT 
CCCGAAAGCG TCTTCGTCTT TGCTCGCTGG CCGGAGCTGT TACGCTGGCT CAACCTCGGC 
TGA
 
Protein sequence
MPSLKNPSET IRFVYFDLDD TLLDHRTAEQ AALADVKAAF PDVFAHVPLE QLHHTYHTIN 
VDLWEQYQRG QIDRPALMHA RFARLIEALG LQGVTPEQLN ACYMERYRRH WRWVPGAREA 
FLTVARHLPV GILTNGFAAV QYAKMERFPE LRQHAKALVI SEEVGVAKPH PELFAHATRA 
AGVAPEAILY VGDSFGSDVL GAKNAGWQVA WFTPAAPAST PESVFVFARW PELLRWLNLG