Gene Rmar_0416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0416 
Symbol 
ID8567050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp456980 
End bp458782 
Gene Length1803 bp 
Protein Length600 aa 
Translation table11 
GC content66% 
IMG OID 
Productcyclic nucleotide-binding protein 
Protein accessionYP_003289708 
Protein GI268315989 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGACGC TCGCCCGGCT GAATCCGTAC TTCTGGAAGT ACCGGCGGCT GTTTGGCCCC 
GGATTGCTCT GCGCCATCGC GTCGGCGCTG TTCGCGATGC TCGCGCCGGG CGTCGTCCGC
CAGGCCGTCG ATAGCGTGCC CCGCTTCGTG GCCTACTACC GGGCCGTCGA GGGCACTTCG
GCTCAGCCGT TCTTCTACGC CTACGCACTG ACGGGCCTGC TTTTCTACGG CGGCGTCATT
CTGGGACTGA GCCTGCTCAG CGGGCTGTTC ACCTTCCTGA TGCGCCGCAC GATCGTGGTG
GCCTCGCGCC ACATCGAGTT TGACCTGCGT AACGCGCTCT ACGAACACCT GCAGCGGCTG
CCGCCGAGCT TCTACCGGAA GTTTCCCACA GGCGACGTGC TTACGCGCGC CACCAGCGAC
ATCGAACAGG TGCGGCGCTA CGTGGGGCCG GCCATCATGT ACGCCACGCG GGCCGTGGTG
CTCATGGTGG CCGCCATCAC GGCCATGCTG CTGATCTCGC CGGAGTTGAC GCTCTACACG
CTGCTACCCA TGCCGCTGCT GGCCGTGGGC GTCTTCTGGG TGGCGCACCT GGTGCACCAG
CGGAGCGATG CGCTGCAGGC CCAGTATGCG CGCCTGACCA GCCGCGTGCA GGAAGCGCTC
AACGGCATTC GCGTGCTGAA GGCCTACACG CGCGAGGAGG CCGAAGCCCG CGCCTTCGAT
GCCGAAAGCG AGGCCTACCG TCGCCGGATG CTCGACCTGG CCCGCGTCGA TGCCTTCTGG
TCGCCGATTT TTCTGCTGCT GACCGGACTT TCGACGATCC TGGTCGTCTG GAAAGGCGGC
CAGCTGGCCA TGGCCGGTGC CATCACGATC GGCAACATCG CCGAGTTCAT CATCTACGTG
GCGCTCATGA CCTGGCCGGT GGCGTCGGTG GGCTTCGTGC TGTCGATGAT CCAGCGGGCG
TCGGCCTCGA TGAACCGGCT CGCCGAGATC TTCGACACCG AGCCGGAGAT CCGGGACGAT
CCGGCCTGGA CGGATTATTC GATCCAGCAG ATCGAGGGTC GTATCACATT CAAAAACGTG
TACTTCCGCT ACGAGGAAGA CGGCCCCTGG GTGCTCGAAG ACATCAGCTT CGACCTGCCG
GCCGGCGGCG TGCTGGGCAT TGTGGGACGC ACGGGCGCGG GCAAGACCAC GCTGGTGGAA
CTGATTCCCC GGCTGATCGA ACCGGTGCGC GGGGTGGTGG AGATCGACGG GCACGACGTG
CGGCGCATCC CGCTGGCCGT GCTGCGCCGC GCCATCGGCT ACGCACCCCA GGACGTGTTT
CTCTTCAGCG ACACGGTGGC GGCCAACATC GCCTTCGGCG AACTGGAGGC CGACCTGGCC
CGCATCGAAG AAGCCGCCTA CGAGGCCGAT CTGCTGGAGA ACGTGCGGCA CTTCCCGCAC
GGCTTCGAGA CGTTCGTCGG GGAGCGCGGC ATCACGCTCT CGGGCGGGCA GAAGCAGCGC
ACGGCGATCG CCCGGGCGCT CATCCGGCGG CCCCGCATTC TCATCCTGGA CGATGCGCTT
TCGGCCGTCG ATACCGAGAC GGAGCGGCGC ATCCTGCGCC AGCTGCGTCG GCACTACGGC
AAGCGGACGG TGGTCATCGT CAGCCATCGC ATCTCGGCCG TGCAGGAGGC TGATCTGATT
CTGGTGCTCG ACGAAGGCCG GATCGTCGAG CGCGGGACGC ACGCCGAACT GCTCAAGCAG
GACGGTCTCT ACGCCCGCCT GTACCGGCAG CAGTTGCTGG AGGAAGAGCT GAAACAACTG
TAG
 
Protein sequence
MGTLARLNPY FWKYRRLFGP GLLCAIASAL FAMLAPGVVR QAVDSVPRFV AYYRAVEGTS 
AQPFFYAYAL TGLLFYGGVI LGLSLLSGLF TFLMRRTIVV ASRHIEFDLR NALYEHLQRL
PPSFYRKFPT GDVLTRATSD IEQVRRYVGP AIMYATRAVV LMVAAITAML LISPELTLYT
LLPMPLLAVG VFWVAHLVHQ RSDALQAQYA RLTSRVQEAL NGIRVLKAYT REEAEARAFD
AESEAYRRRM LDLARVDAFW SPIFLLLTGL STILVVWKGG QLAMAGAITI GNIAEFIIYV
ALMTWPVASV GFVLSMIQRA SASMNRLAEI FDTEPEIRDD PAWTDYSIQQ IEGRITFKNV
YFRYEEDGPW VLEDISFDLP AGGVLGIVGR TGAGKTTLVE LIPRLIEPVR GVVEIDGHDV
RRIPLAVLRR AIGYAPQDVF LFSDTVAANI AFGELEADLA RIEEAAYEAD LLENVRHFPH
GFETFVGERG ITLSGGQKQR TAIARALIRR PRILILDDAL SAVDTETERR ILRQLRRHYG
KRTVVIVSHR ISAVQEADLI LVLDEGRIVE RGTHAELLKQ DGLYARLYRQ QLLEEELKQL