Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_0416 |
Symbol | |
ID | 8567050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 456980 |
End bp | 458782 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | cyclic nucleotide-binding protein |
Protein accession | YP_003289708 |
Protein GI | 268315989 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGACGC TCGCCCGGCT GAATCCGTAC TTCTGGAAGT ACCGGCGGCT GTTTGGCCCC GGATTGCTCT GCGCCATCGC GTCGGCGCTG TTCGCGATGC TCGCGCCGGG CGTCGTCCGC CAGGCCGTCG ATAGCGTGCC CCGCTTCGTG GCCTACTACC GGGCCGTCGA GGGCACTTCG GCTCAGCCGT TCTTCTACGC CTACGCACTG ACGGGCCTGC TTTTCTACGG CGGCGTCATT CTGGGACTGA GCCTGCTCAG CGGGCTGTTC ACCTTCCTGA TGCGCCGCAC GATCGTGGTG GCCTCGCGCC ACATCGAGTT TGACCTGCGT AACGCGCTCT ACGAACACCT GCAGCGGCTG CCGCCGAGCT TCTACCGGAA GTTTCCCACA GGCGACGTGC TTACGCGCGC CACCAGCGAC ATCGAACAGG TGCGGCGCTA CGTGGGGCCG GCCATCATGT ACGCCACGCG GGCCGTGGTG CTCATGGTGG CCGCCATCAC GGCCATGCTG CTGATCTCGC CGGAGTTGAC GCTCTACACG CTGCTACCCA TGCCGCTGCT GGCCGTGGGC GTCTTCTGGG TGGCGCACCT GGTGCACCAG CGGAGCGATG CGCTGCAGGC CCAGTATGCG CGCCTGACCA GCCGCGTGCA GGAAGCGCTC AACGGCATTC GCGTGCTGAA GGCCTACACG CGCGAGGAGG CCGAAGCCCG CGCCTTCGAT GCCGAAAGCG AGGCCTACCG TCGCCGGATG CTCGACCTGG CCCGCGTCGA TGCCTTCTGG TCGCCGATTT TTCTGCTGCT GACCGGACTT TCGACGATCC TGGTCGTCTG GAAAGGCGGC CAGCTGGCCA TGGCCGGTGC CATCACGATC GGCAACATCG CCGAGTTCAT CATCTACGTG GCGCTCATGA CCTGGCCGGT GGCGTCGGTG GGCTTCGTGC TGTCGATGAT CCAGCGGGCG TCGGCCTCGA TGAACCGGCT CGCCGAGATC TTCGACACCG AGCCGGAGAT CCGGGACGAT CCGGCCTGGA CGGATTATTC GATCCAGCAG ATCGAGGGTC GTATCACATT CAAAAACGTG TACTTCCGCT ACGAGGAAGA CGGCCCCTGG GTGCTCGAAG ACATCAGCTT CGACCTGCCG GCCGGCGGCG TGCTGGGCAT TGTGGGACGC ACGGGCGCGG GCAAGACCAC GCTGGTGGAA CTGATTCCCC GGCTGATCGA ACCGGTGCGC GGGGTGGTGG AGATCGACGG GCACGACGTG CGGCGCATCC CGCTGGCCGT GCTGCGCCGC GCCATCGGCT ACGCACCCCA GGACGTGTTT CTCTTCAGCG ACACGGTGGC GGCCAACATC GCCTTCGGCG AACTGGAGGC CGACCTGGCC CGCATCGAAG AAGCCGCCTA CGAGGCCGAT CTGCTGGAGA ACGTGCGGCA CTTCCCGCAC GGCTTCGAGA CGTTCGTCGG GGAGCGCGGC ATCACGCTCT CGGGCGGGCA GAAGCAGCGC ACGGCGATCG CCCGGGCGCT CATCCGGCGG CCCCGCATTC TCATCCTGGA CGATGCGCTT TCGGCCGTCG ATACCGAGAC GGAGCGGCGC ATCCTGCGCC AGCTGCGTCG GCACTACGGC AAGCGGACGG TGGTCATCGT CAGCCATCGC ATCTCGGCCG TGCAGGAGGC TGATCTGATT CTGGTGCTCG ACGAAGGCCG GATCGTCGAG CGCGGGACGC ACGCCGAACT GCTCAAGCAG GACGGTCTCT ACGCCCGCCT GTACCGGCAG CAGTTGCTGG AGGAAGAGCT GAAACAACTG TAG
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Protein sequence | MGTLARLNPY FWKYRRLFGP GLLCAIASAL FAMLAPGVVR QAVDSVPRFV AYYRAVEGTS AQPFFYAYAL TGLLFYGGVI LGLSLLSGLF TFLMRRTIVV ASRHIEFDLR NALYEHLQRL PPSFYRKFPT GDVLTRATSD IEQVRRYVGP AIMYATRAVV LMVAAITAML LISPELTLYT LLPMPLLAVG VFWVAHLVHQ RSDALQAQYA RLTSRVQEAL NGIRVLKAYT REEAEARAFD AESEAYRRRM LDLARVDAFW SPIFLLLTGL STILVVWKGG QLAMAGAITI GNIAEFIIYV ALMTWPVASV GFVLSMIQRA SASMNRLAEI FDTEPEIRDD PAWTDYSIQQ IEGRITFKNV YFRYEEDGPW VLEDISFDLP AGGVLGIVGR TGAGKTTLVE LIPRLIEPVR GVVEIDGHDV RRIPLAVLRR AIGYAPQDVF LFSDTVAANI AFGELEADLA RIEEAAYEAD LLENVRHFPH GFETFVGERG ITLSGGQKQR TAIARALIRR PRILILDDAL SAVDTETERR ILRQLRRHYG KRTVVIVSHR ISAVQEADLI LVLDEGRIVE RGTHAELLKQ DGLYARLYRQ QLLEEELKQL
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