| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_0383 |
|---|
| Symbol | |
|---|
| ID | 8567017 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | - |
|---|
| Start bp | 426599 |
|---|
| End bp | 427372 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | putative transcriptional acitvator, Baf family |
|---|
| Protein accession | YP_003289675 |
|---|
| Protein GI | 268315956 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0273469 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTGGC TGGCACTGGA TCTGGGCAAC AGTGCGCTGA AGGGCGGTCT GTTCGAAGCG
GACCGTCTGG TGCACACCTT CCGCGTGGCC GGGCCGGACG CGGCCGGGCT GCAACAGCAA
CTGGCCGCCG CGCTGCGCGA CTACCGGCCG ACGCGGGCAG CCATGGCGTC GGTGGTGCCC
GCCCGCACGC CCGTCGTGCA GGAAACCGTG CAGCAGCTGT CCGGCGTGCG GCCGGCGCTG
ATCGGGCCGG ACTGGCGTCT GCCCTTCACG CTGGCCTACG AGACGCCGCA CACGCTGGGC
ACTGACCGAC TGGCGGCCGC CGTCGCCGCC TGGGAGCTTT ATGGACGCCC CCGGCGACGT
CCCGTGCTGG CCCTGCTGGC GGGCACGGCG TTCACGATCG AAGTGATCGA CGAGCACGGC
TGCTACCAGG GGGGCGTGAT CGCGCCCGGT CCGTCCCTGA TGCGTCAGGC CCTGGCGGAA
GGGACGGCCC AGCTCCCCGA AGTGCCGCTC GAATGGCCGC CTTCACCTGT CGGACGCTCC
ACGCGCACGG CCATTCAGGC CGGCCTGCTC TACGGCTTCG TGGAAAGCGC ACGGGGACTG
TTGCGCCGGG TGGCCGAAAC GCTTGCGACT GCGCCCCTCG TCATCCTCAG CGGCGGCTGG
GCTTCGCTGT TGCAGACGCA CCTCGGCCAG CAGATCGACG TGCACGATCC CCATCTGGTG
CTCCGGGGCG TTTACCTCCT GCTGGAGCGT AATCCAGATC GGGGCCTACC CTGA
|
|---|
| Protein sequence | MTWLALDLGN SALKGGLFEA DRLVHTFRVA GPDAAGLQQQ LAAALRDYRP TRAAMASVVP
ARTPVVQETV QQLSGVRPAL IGPDWRLPFT LAYETPHTLG TDRLAAAVAA WELYGRPRRR
PVLALLAGTA FTIEVIDEHG CYQGGVIAPG PSLMRQALAE GTAQLPEVPL EWPPSPVGRS
TRTAIQAGLL YGFVESARGL LRRVAETLAT APLVILSGGW ASLLQTHLGQ QIDVHDPHLV
LRGVYLLLER NPDRGLP
|
|---|
| |