Gene Rmar_0337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0337 
Symbol 
ID8566970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp371890 
End bp373752 
Gene Length1863 bp 
Protein Length620 aa 
Translation table11 
GC content69% 
IMG OID 
Productpyruvate flavodoxin/ferredoxin oxidoreductase domain protein 
Protein accessionYP_003289630 
Protein GI268315911 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGTCT TTGAAAAACC TGTGGAGGTC CTCCCCGAGG CGACCGTGCT CTTTGCCGGC 
GACTCGGGTG ACGGCATGCA GCTGACGGGC CTGCAGTTCG CCCGGGCCAC CGCACTGGCC
CGCAACGACC TGGCCACGCT GCCCGACTTT CCCGCCGAGA TCCGCGCCCC GGCCGGCACC
ACCTACGGCG TGAGCGGCTA CCAGCTTCAC TTCGGCTCGG TCCCGGTGCG CACGCCGGGC
GATGCCGTCG ATATGCTGGT GGCGATGAAC CCGGCCGCGC TGAAGGTGCA CCTGCCGCGC
GTGCGCCGAG GTGGGACGCT GCTCATCAAC GTGAACGCCT TCGACCGCCG CGGGCTGGAG
CTGGCCCGCT ACGAGACGAA CCCGCTCGAG GACGGCTCGC TTGAAGGCTA CCAGGTCATC
CCGGTCGAGC TGACGCGTCT GACGCACGAG GCGCTGGCCG ACAGCGGGCT CGACAAGAAG
GAGATCGACC GCTGCAAGAA CATGTTCGCG CTGGGGCTCG TGCTCTGGCT CTACTCGCGC
CCGCTGAAGC CCGTCGAGGA ATGGCTGGCG CAGAAATTTG CGAACCGGCC CGAGATCCGG
GATGCCAACC TGAAGGTCCT GCACAAAGGT TATCACTACG GCGAGACGCA CGAGCTGTTT
GCCGTCCGCT ACGAGGTGCG GCCGGCCCGT CTGGAACCCG GTCTGTACCG GGCCATCCGG
GGCGTCGAGG CGCTGGCGCT GGGGTTGATC GCGGCCAGTC ACCAGAGCGG CCTGCCACTC
TTCTATGGCT CCTACCCGAT CACGCCGGCC TCGGACCTGC TGCACGAGCT GAGCCGGCAC
AAGAATTTCG GCGTGATGAC CTTCCAGGCC GAGGACGAGA TTGCGGCCGT GGGGGCGGCG
CTGGGCGCCA GCTTCGGCGG GGCGCTGGGC GTGACGGCCA CCAGCGGCCC GGGTCTGGCG
CTCAAGGCCG AAACGATCGG CCTGGCGGTG ATGACCGAGC TGCCGCTCGT GGTGATCGAC
CTGCAGCGCG GCGGTCCCTC GACGGGTCTG CCCACCAAGA CGGAGCAGAG CGACCTGCTC
TTTGCACTCT ACGGCCGCCA CGGCGAGGCC CCGCTGCCCG TGCTGGCGGC CAGCTCGCCC
GGCGACTGCT TCTATGCGGC CTACGAAGCC AGCCGCATCG CCGTGCGCTA CATGACGCCG
GTGATCCTGC TGGCCGACGG CTACCTGGCC AACGGCGCCG AGCCCTGGCG CGTGCCGGAC
GTCGCCTCGC TGCCTCCTTT TGAAGTGAAG TTTGCTACGG AGCCCAACTT CCGCCAGAAC
GGCGACGTGC GCTTTCTGCC CTACCGCCGC GACCCCGAGA CGCTGGCGCG TCCGTGGGCG
CGTCCGGGCA CGCCCGGCCT GGAGCACCGC ATCGGCGGTC TCGAAAAAGA GCACGAGACG
GGCAACGTCT CGTACGACCC GGCCAACCAC CAGCGCATGG TGAAGCTCCG CGCCGAAAAG
GTGGCGCGCG TGGCCCGGGA GATTCCGCCC ACGAAGGTCT TTGGCGATCC CGAGGGCGAC
GTGTTGCTCA TCGGCTGGGG TTCGACGCGC GGCGCCATCG AAGCGGCCGT CGAGCGCCTG
CAGGCCCGCG GCCTGCGCGT CGGGAGCGTC CACCTGCGCT ATCTGAATCC GCTACCGCCC
GATCTGCCGA CCATTTTCGA GCGCTACCAC CATCTGGTGG TGCCCGAGCT GAACAACGGC
CAGCTCGTAC GCGTCCTGCG CGACGCCTAC CTGCGGCCGT TCGTGCCGCT GAACAAGATC
CAGGGCCTGC CCTTCCAGGC CCGCGAGATC GAGGAGTTTG TGGCCGACCT GGTGCAGTCC
TAA
 
Protein sequence
MAVFEKPVEV LPEATVLFAG DSGDGMQLTG LQFARATALA RNDLATLPDF PAEIRAPAGT 
TYGVSGYQLH FGSVPVRTPG DAVDMLVAMN PAALKVHLPR VRRGGTLLIN VNAFDRRGLE
LARYETNPLE DGSLEGYQVI PVELTRLTHE ALADSGLDKK EIDRCKNMFA LGLVLWLYSR
PLKPVEEWLA QKFANRPEIR DANLKVLHKG YHYGETHELF AVRYEVRPAR LEPGLYRAIR
GVEALALGLI AASHQSGLPL FYGSYPITPA SDLLHELSRH KNFGVMTFQA EDEIAAVGAA
LGASFGGALG VTATSGPGLA LKAETIGLAV MTELPLVVID LQRGGPSTGL PTKTEQSDLL
FALYGRHGEA PLPVLAASSP GDCFYAAYEA SRIAVRYMTP VILLADGYLA NGAEPWRVPD
VASLPPFEVK FATEPNFRQN GDVRFLPYRR DPETLARPWA RPGTPGLEHR IGGLEKEHET
GNVSYDPANH QRMVKLRAEK VARVAREIPP TKVFGDPEGD VLLIGWGSTR GAIEAAVERL
QARGLRVGSV HLRYLNPLPP DLPTIFERYH HLVVPELNNG QLVRVLRDAY LRPFVPLNKI
QGLPFQAREI EEFVADLVQS