Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_0303 |
Symbol | |
ID | 8566933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 330563 |
End bp | 331843 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003289596 |
Protein GI | 268315877 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0634781 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAGGCCG CACCGTCCCG GCCGGTCACT CGCGCCGCCT CGGCGACGGG CTATGTGGCG CTGGTGCGCC GCAACGTACA CTTTCGCCGG CTGTGGCTGG GCAATCTCAT CTCACTGCTG GGCGACTGGT TCAACACAAT TGCCCTCTAC ACGCTGGTCT CGGAGCTGAC CGGCTCGCCG TTCGCACTGG GCGGCGTGTT TCTGACAAAG CTGCTGCCCT GGGCGCTGGC CTCGCCGCTG GCCGGGCTGC TGGTGGATCG GTTCGACCGA CGGCGGCTCA TGATCGGCGC CGATCTGGTA CGGGCCGTGA TCGTGCTGGG CTTTCTGCTG ATCGACGAGC CCGGCGAGGT GTACCTGGTC TACGTGCTGA CCACGCTGCA GGTGGTCGTG ACGGCCGTCT TTCAGCCGGC CAAGAGCGCA TCGATCCCGA ACATCGTCCG CACCGACGAA CTGTTGACGG CCAACGCGCT CATGTCGGCC ACCTGGTCGG TGATGCTGGC GCTGGGGGCA GCTTCGGGCG GACTGGTGAC GGCCTGGCTG GGCACGGCAC CGGTGTTCGT GATCGACAGC CTGACCTATC TGGTCTCGGC CTTTTTCATC TACCGGACCG TCATCCCGCA ACAGACGGCC CCGGCCGCGG GCGGCCTGCT GCGGACGGCC AGGCGCGAGC TGCTGGACGG CTGGCGCTAC CTCACCACGC ACCCCGGTGT CGGGCGCATC GCCCTGGCCA AGAGCGCCTG GGCGCTGGCC GGCGGAGGGC TCGTCTACAT GCTGGCGCTG ATTGGCGAGG CGATCGAGCC GACGGCGCAG GCGGCCGGGA TCGGCTGGCT GTTTGCCGCA CGGGGGCTGG GCACGGGGAT CGGTCCGGTG CTGGCCCGGG CGATCTTCCG GGATGCGCGG CGCTGGCCGG CCGTGCTGGG CTGGAGCATC GTGCTCAGCG GCCTCTGCTA CGGCGTGGTG GGATTGCAGG ACTGGACCTA TGCCGTGGCG CCCGCCGTGC TGCTGGCCCA TGCGGCCAGC GGCGCCAACT GGGTGCTGGC AAGCGTGCTG CTCCAGCAGC GCACGGAAGA CGCCTTCCGG GGACGCGTGT TTGCCACGGA GTGGCTGGGC GTGCTGTTTT CGGAGAGTTG CTCGATTCTG GCGGCCAGCA TGCTGCTGGA GTGGCAGGTG CTCTCGCTGC GAGAAGCCGT GCTGGCGTTT GCGCTCGTGC AGGGGCTGAT CGGGCTGGCC TGGCTGGCCG TGATCGTACC GCGGGAGCGA CGGGCTTACT CGGGCGTCTG A
|
Protein sequence | MEAAPSRPVT RAASATGYVA LVRRNVHFRR LWLGNLISLL GDWFNTIALY TLVSELTGSP FALGGVFLTK LLPWALASPL AGLLVDRFDR RRLMIGADLV RAVIVLGFLL IDEPGEVYLV YVLTTLQVVV TAVFQPAKSA SIPNIVRTDE LLTANALMSA TWSVMLALGA ASGGLVTAWL GTAPVFVIDS LTYLVSAFFI YRTVIPQQTA PAAGGLLRTA RRELLDGWRY LTTHPGVGRI ALAKSAWALA GGGLVYMLAL IGEAIEPTAQ AAGIGWLFAA RGLGTGIGPV LARAIFRDAR RWPAVLGWSI VLSGLCYGVV GLQDWTYAVA PAVLLAHAAS GANWVLASVL LQQRTEDAFR GRVFATEWLG VLFSESCSIL AASMLLEWQV LSLREAVLAF ALVQGLIGLA WLAVIVPRER RAYSGV
|
| |