Gene Rmar_0301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0301 
Symbol 
ID8566931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp328080 
End bp328862 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content66% 
IMG OID 
Productpeptidyl-prolyl cis-trans isomerase cyclophilin type 
Protein accessionYP_003289594 
Protein GI268315875 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATAC GATGGCTTGC AGGCGTGGCG CTGGCGTTTT TTGTAGCAGC CTGTCAGTCG 
GCCCCGTCCA CACCGTCGGT CGAAGCCGAT AGCCTGGCGC AGGCGACCGA CACGCTGGCG
CTTCCCGCCA CCAACTACTA CGAAATCCGT ACGCCGCTGG GCCGTATGGT CGTGCGGCTC
TACGACGAAA CGCCGCTGCA CCGGGACAAC TTCAAGCGGC TGGTGGCGGC AGGCTTCTAC
GACAGCACGA CGTTTCACCG GGTGATCGAC GGGTTCGTCA TTCAGGGCGG CGATCCGAAC
TCGAAGGACG CCGATCCCTC GAACGACGGC ACCGGCGGGC CGGGCTACAC GCTTCCGGCC
GAGATTCGTC CCGGCCTGTT CCACAAACGC GGCGCACTGG CCGCCGCCCG TCAGGGCGAC
GAGGTGAACC CCGAGCGGCG CTCCAGCGGC AGCCAGTTCT ACCTGGTCGT CGGGCGCACA
TTCGACGAGG CCACGCTGGA CGAGATCGAA GTCTACCTGC GGGAGCAGAT CCCGGACCCG
GACTTCGCCT TCCCGGACTC GGTCCGGCAG CTTTACCAGA CGGTGGGCGG GGCGCCGTTT
CTGGACGGAC TCTACACGGT CTTCGGTGAA CTGGTCGAAG GCTTCGAGGT GATGGACGCC
ATCGCGCGGG TTCCCACGCC GCGAAGCACC GGTCGGCAGG CTCCGCCGAC AATGCTCGAT
CGGCCGCTGC AGCCCGTTCC CATGACGATT CGCCCGCTTG AAAACTATTC ACCCGGCTCC
TGA
 
Protein sequence
MNIRWLAGVA LAFFVAACQS APSTPSVEAD SLAQATDTLA LPATNYYEIR TPLGRMVVRL 
YDETPLHRDN FKRLVAAGFY DSTTFHRVID GFVIQGGDPN SKDADPSNDG TGGPGYTLPA
EIRPGLFHKR GALAAARQGD EVNPERRSSG SQFYLVVGRT FDEATLDEIE VYLREQIPDP
DFAFPDSVRQ LYQTVGGAPF LDGLYTVFGE LVEGFEVMDA IARVPTPRST GRQAPPTMLD
RPLQPVPMTI RPLENYSPGS