| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_0286 |
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| Symbol | |
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| ID | 8566916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodothermus marinus DSM 4252 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013501 |
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| Strand | + |
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| Start bp | 312933 |
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| End bp | 314768 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003289580 |
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| Protein GI | 268315861 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.109454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGACGCC TGTTGCTGCT GACGCTGCTG CTGATCGGAT GCGCGCCGGA GCGTCCCTCC
GGTCCCCGGG TGCCCGACTG GGCGGCCGAT GCCGTCTGGT ACCAGATTTT CCCCGAGCGC
TTCTGGAACG GCGATCCCAC GAACGATCCC ACCCGCGAAT CGCTGGAGTA TCCGCCCGCG
TTGCCCGAGG CGCCGCCTTC GTGGCGGATT TCGCCCTGGA CCGGCGACTG GTACGCCCGC
GACGACTGGG AACGGGAAAT GGGCGACGAC TTCTACGAGA GCTATGCGGT CTTTCACCGG
CGCTACGGCG GCGACCTGCA GGGCGTGATC GATCGACTCG ACTATCTGCA GGAGCTGGGC
ATCACGGCCA TCTACTTCAA CCCGGTCTTC TACGCCCGCT CGCTGCACAA GTACGACGGC
AACACCTATC ACCACATCGA CCCGTACTTC GGGCCCGATC CGGAAGGCGA CCTGGCACTC
ATGGCGCAGG AAACCGAAGA CCCGAACACC TGGCACTGGA CGGCCGCCGA TAGCCTGTTT
CTGCGGCTGA TCCGGGAAGC CCATGCCCGC GGCATCCGCG TGATCATCGA CGGCGTGTTC
AACCACACGG GTCGCGACTT TTTCGCCTTT GCCGACCTGC GCCGCCGCCA GCAGGACTCG
CCCTACAGGG ACTGGTACAT CGTCTACAGC TTCGACGACC CGGCCACACC CGACACGAAC
GAATTTGACT ACGAGGGCTG GTGGGGCGTC AAGACGCTCC CCGTCTTTGC CGACAACGAG
GACGGCACCG ACCTGCATCC CGGTCCCAAA CGCTACATCT TCCACGCCAC GGCTCGCTGG
ATGGACCCCG ACGGCGACGG CGATCCGTCC GATGGCATCG ACGGCTGGCG GCTCGACGTG
ACGAACGAGG TGCCCGTGGG CTTCTGGGCC GACTGGAACG CGTACGTGCG GGAACTGAAC
CCGAACGCCT ACACGGTCAC CGAACTCTGG CAGGACGCCA GCGAGATGAT CGTGCAGGGC
GGCTTTTCGG CCACGATGAA CTACTATGCA TTTGCCTTTC CGGTGAAGGC GTTTCTGATC
GACTTCGGAC TGGAGGCGCC CGAGTTTGCC CGCCTGCTTG ACGAACGACG CAATCGCTAC
CCGGTGGCCG TGCAGTACGC CATGCAGAAC CTGATCGACT CGCACGACAC GGATCGGCTG
GCGTCGATGA TCGTCAACCG GGATCCGGCG GACGTGCACC GCGAACAGTT CGGCTACGAT
CGGGATAACT CGCCGCGCCA CAACCCGGAT TACGACGTGC AGGCGCCCGA CGCCACCGAC
CGGGCCATTC AGCGCCTGGT GGCGCTTTTC CAGATGACCT ACGTGGGCGC GCCGATGATC
TACTACGGCA CGGAGGCGGG CATGTGGGGC GCCGACGACC CGGACGATCG CAAGCCCATG
GTCTGGCCCG AGCTGACCTA CGCCGACGAG GCATCCGATC CGCTGGGGCG GCCGCGCCGG
CCCGATCCGG TGCGCTTCGA CAGCACGCTC TTTCGCTTCT ACCGGCAGGC AATCGCCCTG
CGGAAGCAAT CGGCCGCGCT GCGTCGCGGC ACGTTCGAGG TGCTGATGGC CGACGGCGGG
CTGTTCGTGT TCCGGCGGGC ACTCGCGGAC GAACAGGTGC TGGTGGCGCT CAACCGTGAG
GAAAACGCAC GGGAGGTGGC CCTGTCGTTG CCTGAAGCGG ACCGTTTCCG GGTGCGTCTG
GCAACGGTGT CCGAAGGCTA TGCCGTCACC GCCACAGCCG ATACGCTTCG CCTGACGCTA
CCCTCGCTGA GCGGTCTTGT GCTGGTCGGG CAGTGA
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| Protein sequence | MRRLLLLTLL LIGCAPERPS GPRVPDWAAD AVWYQIFPER FWNGDPTNDP TRESLEYPPA
LPEAPPSWRI SPWTGDWYAR DDWEREMGDD FYESYAVFHR RYGGDLQGVI DRLDYLQELG
ITAIYFNPVF YARSLHKYDG NTYHHIDPYF GPDPEGDLAL MAQETEDPNT WHWTAADSLF
LRLIREAHAR GIRVIIDGVF NHTGRDFFAF ADLRRRQQDS PYRDWYIVYS FDDPATPDTN
EFDYEGWWGV KTLPVFADNE DGTDLHPGPK RYIFHATARW MDPDGDGDPS DGIDGWRLDV
TNEVPVGFWA DWNAYVRELN PNAYTVTELW QDASEMIVQG GFSATMNYYA FAFPVKAFLI
DFGLEAPEFA RLLDERRNRY PVAVQYAMQN LIDSHDTDRL ASMIVNRDPA DVHREQFGYD
RDNSPRHNPD YDVQAPDATD RAIQRLVALF QMTYVGAPMI YYGTEAGMWG ADDPDDRKPM
VWPELTYADE ASDPLGRPRR PDPVRFDSTL FRFYRQAIAL RKQSAALRRG TFEVLMADGG
LFVFRRALAD EQVLVALNRE ENAREVALSL PEADRFRVRL ATVSEGYAVT ATADTLRLTL
PSLSGLVLVG Q
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