Gene Rmar_0280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0280 
Symbol 
ID8566910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp298170 
End bp299828 
Gene Length1659 bp 
Protein Length552 aa 
Translation table11 
GC content70% 
IMG OID 
ProductPpiC-type peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_003289574 
Protein GI268315855 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGTTGT TGTTGCTGGC CGGCTGCCAT GCCGGCTCGG CGCAGCAGAC GCTGCTGGCC 
GAAGGGCCGG GCGTGCACAT CACGGCCGAC GCCTTCCGGG AGGCGTACCT GGACTACCTG
TTGCGCACCG GCCAGACCGA CAGCCCGCGG TTGCGCCGAC TGTTTCTCGA GCAGATGATC
CGGGAGGCAC TGGTGGCCTA CGAAGCCCGG CGGCAGGGGC TGGATCGCAC TCCGGCCTAC
GAAGAAGAGG CCCGGGCCGT CGAGACCAAG CTGCTCGTGG AGGCCTACGC CCGGCGCGTG
CTCTACGACA CGGTACGGGT GCGCGAAGCG GAGCTGGCCG AGGCGTTCGT GCGCATCAAC
ACCGAGGTGC GGGCGCGTCA CCTGTGGGCG CCCACCCGGG CGGCCGCCGA GTCGCTTTAT
GCCCGCCTCC AGGCCGGTGC GTCGTTCGAG GAGCTGGCCG CCGGGGTCTT CCGCGACACC
GCACTGGCCC GGAGCGGCGG CGATCTGGGC TGGTTCTCGT TTGACGAAAT GGATCCGGCC
TTTGAGGACG TGGCCTTCCG GCTCAGGCCG GGCGAGATTT CGTCGCCGGT GCGCACGGCC
TACGGCTACT CGATCATTCA GGTGACGGAT CGGTTCACGA AGCCGATCCT GACCGAGACC
GAGTTTGCGC AGAAACGGCC CCTTCTGGAG CGTTATCTGC GCTACCGGAA GCAGCAGGCC
GCCCGGGAAG CCTGCGCACG TAGCCTGGCC GACTCGTTGC AGATTCGCTT TCACGAGGCG
ACGCTGCGTC GACTCTACGA CCGGATTGCA GGGCGCGTGA CGCAGGAGGA AATGGAAGGG
ACAACCGAAG ACTGGTTGCA GGAACCGCTG CTGACGTTCG GTCCCGCCGC AGAGCGTGTG
ACCTGGACGG TGGCCGACTT CCGGGAGCAG GCGCGGCGGA CGAGTCGGGC GCAACGGGAG
GCGGCCGCGC GCTCGCCGGA GGCGCTGGAG GAATTCGCCC GCGGACTGGT GGTGCGTCAC
GTGCTGGCCG AGCGCGCCCG CGCGGCCGGT CTGCACCGCA GCCCGGCCTT CGCGCAGGCC
CGGCAGGAAG CACTCGATCG CTGGCTCTAC CGGTACGTGC GACAGCAGGT GGAGTCCGGA
GCCGCGGTGC CGGAGGACAC GCTGCGGGCC TTCTACAAGG CGCACCGGGA GGACTTCCGG
ATGCCGGCCC GGCGGGCCGT CTGGGAAATT CTGGTGCCCA CCGAAGCGGA GGCACAGCGC
ATCCGGACGC TGCTGACGGC CACGCCGTTC GAGGAGCTGG CCCGGCACTA CTCGCGGCGA
CCGGGCGCGG CGGCGACAGG CGGCTATCTG GGTTTCGTGG CCGAAGCGCA GCTGGGTGCG
GCGGGGAAGG CCGTCTTTGC CGCCCGCGAA GGGGAGGTGC TGGGGCCGCT GCGGATTGCC
GACGGCTACG TATTGTTGAA AGTGGGTGCC GAGCAGCCCG AGCGTCCCAT GACCTTCGAG
GAAGCGCGGC CGCTCATCGA ACGCCAGCTC CGGCCTTTCT TTGTGCGCAG GCGCTGGCAG
GAGCACCTGG CGGAGCTGGC CGCGCGCCAC GCAGACCGGA TCACGCGCCA TCTGTCCCGA
CTGGACACGC TACGCCTGAC ATCCCCCACC GACGCCTGA
 
Protein sequence
MGLLLLAGCH AGSAQQTLLA EGPGVHITAD AFREAYLDYL LRTGQTDSPR LRRLFLEQMI 
REALVAYEAR RQGLDRTPAY EEEARAVETK LLVEAYARRV LYDTVRVREA ELAEAFVRIN
TEVRARHLWA PTRAAAESLY ARLQAGASFE ELAAGVFRDT ALARSGGDLG WFSFDEMDPA
FEDVAFRLRP GEISSPVRTA YGYSIIQVTD RFTKPILTET EFAQKRPLLE RYLRYRKQQA
AREACARSLA DSLQIRFHEA TLRRLYDRIA GRVTQEEMEG TTEDWLQEPL LTFGPAAERV
TWTVADFREQ ARRTSRAQRE AAARSPEALE EFARGLVVRH VLAERARAAG LHRSPAFAQA
RQEALDRWLY RYVRQQVESG AAVPEDTLRA FYKAHREDFR MPARRAVWEI LVPTEAEAQR
IRTLLTATPF EELARHYSRR PGAAATGGYL GFVAEAQLGA AGKAVFAARE GEVLGPLRIA
DGYVLLKVGA EQPERPMTFE EARPLIERQL RPFFVRRRWQ EHLAELAARH ADRITRHLSR
LDTLRLTSPT DA