Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_0280 |
Symbol | |
ID | 8566910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 298170 |
End bp | 299828 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_003289574 |
Protein GI | 268315855 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGGTTGT TGTTGCTGGC CGGCTGCCAT GCCGGCTCGG CGCAGCAGAC GCTGCTGGCC GAAGGGCCGG GCGTGCACAT CACGGCCGAC GCCTTCCGGG AGGCGTACCT GGACTACCTG TTGCGCACCG GCCAGACCGA CAGCCCGCGG TTGCGCCGAC TGTTTCTCGA GCAGATGATC CGGGAGGCAC TGGTGGCCTA CGAAGCCCGG CGGCAGGGGC TGGATCGCAC TCCGGCCTAC GAAGAAGAGG CCCGGGCCGT CGAGACCAAG CTGCTCGTGG AGGCCTACGC CCGGCGCGTG CTCTACGACA CGGTACGGGT GCGCGAAGCG GAGCTGGCCG AGGCGTTCGT GCGCATCAAC ACCGAGGTGC GGGCGCGTCA CCTGTGGGCG CCCACCCGGG CGGCCGCCGA GTCGCTTTAT GCCCGCCTCC AGGCCGGTGC GTCGTTCGAG GAGCTGGCCG CCGGGGTCTT CCGCGACACC GCACTGGCCC GGAGCGGCGG CGATCTGGGC TGGTTCTCGT TTGACGAAAT GGATCCGGCC TTTGAGGACG TGGCCTTCCG GCTCAGGCCG GGCGAGATTT CGTCGCCGGT GCGCACGGCC TACGGCTACT CGATCATTCA GGTGACGGAT CGGTTCACGA AGCCGATCCT GACCGAGACC GAGTTTGCGC AGAAACGGCC CCTTCTGGAG CGTTATCTGC GCTACCGGAA GCAGCAGGCC GCCCGGGAAG CCTGCGCACG TAGCCTGGCC GACTCGTTGC AGATTCGCTT TCACGAGGCG ACGCTGCGTC GACTCTACGA CCGGATTGCA GGGCGCGTGA CGCAGGAGGA AATGGAAGGG ACAACCGAAG ACTGGTTGCA GGAACCGCTG CTGACGTTCG GTCCCGCCGC AGAGCGTGTG ACCTGGACGG TGGCCGACTT CCGGGAGCAG GCGCGGCGGA CGAGTCGGGC GCAACGGGAG GCGGCCGCGC GCTCGCCGGA GGCGCTGGAG GAATTCGCCC GCGGACTGGT GGTGCGTCAC GTGCTGGCCG AGCGCGCCCG CGCGGCCGGT CTGCACCGCA GCCCGGCCTT CGCGCAGGCC CGGCAGGAAG CACTCGATCG CTGGCTCTAC CGGTACGTGC GACAGCAGGT GGAGTCCGGA GCCGCGGTGC CGGAGGACAC GCTGCGGGCC TTCTACAAGG CGCACCGGGA GGACTTCCGG ATGCCGGCCC GGCGGGCCGT CTGGGAAATT CTGGTGCCCA CCGAAGCGGA GGCACAGCGC ATCCGGACGC TGCTGACGGC CACGCCGTTC GAGGAGCTGG CCCGGCACTA CTCGCGGCGA CCGGGCGCGG CGGCGACAGG CGGCTATCTG GGTTTCGTGG CCGAAGCGCA GCTGGGTGCG GCGGGGAAGG CCGTCTTTGC CGCCCGCGAA GGGGAGGTGC TGGGGCCGCT GCGGATTGCC GACGGCTACG TATTGTTGAA AGTGGGTGCC GAGCAGCCCG AGCGTCCCAT GACCTTCGAG GAAGCGCGGC CGCTCATCGA ACGCCAGCTC CGGCCTTTCT TTGTGCGCAG GCGCTGGCAG GAGCACCTGG CGGAGCTGGC CGCGCGCCAC GCAGACCGGA TCACGCGCCA TCTGTCCCGA CTGGACACGC TACGCCTGAC ATCCCCCACC GACGCCTGA
|
Protein sequence | MGLLLLAGCH AGSAQQTLLA EGPGVHITAD AFREAYLDYL LRTGQTDSPR LRRLFLEQMI REALVAYEAR RQGLDRTPAY EEEARAVETK LLVEAYARRV LYDTVRVREA ELAEAFVRIN TEVRARHLWA PTRAAAESLY ARLQAGASFE ELAAGVFRDT ALARSGGDLG WFSFDEMDPA FEDVAFRLRP GEISSPVRTA YGYSIIQVTD RFTKPILTET EFAQKRPLLE RYLRYRKQQA AREACARSLA DSLQIRFHEA TLRRLYDRIA GRVTQEEMEG TTEDWLQEPL LTFGPAAERV TWTVADFREQ ARRTSRAQRE AAARSPEALE EFARGLVVRH VLAERARAAG LHRSPAFAQA RQEALDRWLY RYVRQQVESG AAVPEDTLRA FYKAHREDFR MPARRAVWEI LVPTEAEAQR IRTLLTATPF EELARHYSRR PGAAATGGYL GFVAEAQLGA AGKAVFAARE GEVLGPLRIA DGYVLLKVGA EQPERPMTFE EARPLIERQL RPFFVRRRWQ EHLAELAARH ADRITRHLSR LDTLRLTSPT DA
|
| |