Gene Rmar_0276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0276 
Symbol 
ID8566906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand+ 
Start bp294058 
End bp294720 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content61% 
IMG OID 
ProductRhomboid family protein 
Protein accessionYP_003289570 
Protein GI268315851 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.285023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACCGCG ACTACGACTA CTATCAGCCG CCCACGCAGT TTGCGGTTTT TCCGCCGGTC 
GTCAAGAACC TGTTGATTCT GAACGGCCTG GTGTTTCTGG CGCAACTGGT GCCCACCACC 
GATCGGCTGC TCATCGAATG GTTTGCGCTC TGGCCGCTGG GCCTGCCGGA CTTCTACCCG 
GGCTTCTGGC CCTGGCAGCT CATCACCTAC AGTTTCCTGC ACGGTGGCTT TGCCCACCTT 
TTCTTCAATA TGTTCGCGCT CTGGATGTTT GGCGTGCCGA TCGAGCGGGC CTGGGGCTCC 
CGGCGTTTCG GCGTGTACTA CTTCGTATGT GTGGTCGGGG CGGGCCTGAC GCAGTTGCTC 
GTCGTCACGC TCAGCGGGGC GGTGTATCCG ACGGTAGGCG CTTCGGGCGG CGTGTTCGGG 
ATCCTACTGG CCTTCGGGAT GATGTTTCCC AACACGCCCA TCTACCTGTA CTTTCTCTTT 
CCGATCAAGG CCAAGTGGCT CGTGATTGGC TACGGATTGC TGGAGCTATG GGCCGGCGTG 
ACGGGCACGC AATCGGGCGT GGCGCACTTT GCCCATTTGG GGGGCATGCT GTTCGGCTTT 
CTGCTGATTC AGTACTGGCG GGGTCGGCTG CCCTGGCGGC CGTCGCGACG GCTGTACTGG 
TAA
 
Protein sequence
MYRDYDYYQP PTQFAVFPPV VKNLLILNGL VFLAQLVPTT DRLLIEWFAL WPLGLPDFYP 
GFWPWQLITY SFLHGGFAHL FFNMFALWMF GVPIERAWGS RRFGVYYFVC VVGAGLTQLL 
VVTLSGAVYP TVGASGGVFG ILLAFGMMFP NTPIYLYFLF PIKAKWLVIG YGLLELWAGV 
TGTQSGVAHF AHLGGMLFGF LLIQYWRGRL PWRPSRRLYW