Gene Rmar_0258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0258 
Symbol 
ID8566888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp273163 
End bp274356 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content68% 
IMG OID 
Productpeptidase M50 
Protein accessionYP_003289552 
Protein GI268315833 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAGCCGA TTCCGGGCAT CCGGTGGCGT GAAACGGTCG CGGCGCCCCC GCGGCGGCCG 
CAACGGGTGT GGCTGCATCT GCTGCTGTTC GTGCTGACGC TGGTGACCAC CACGCTGACC
TGGCCCGACT GGGCGGGTCG CTGGCTGCTC TACGAACGGG TAGGATACGG CGCGTTGCTG
GCCGACGGCC TGCGCTTCAG CCTGCCGCTG CTACTGATCC TGACCGTGCA CGAGTTCGGG
CACTACCTGG CCGCCCGCTT CCATCGGATC GACGCCACAT TGCCCTACTA CATTCCGTTT
CCGTTCAACG GCATCGGAAC GTTCGGGGCC GTCATCCGCA TCCGGGAGCC GATTCCCGAC
ACGCGCTCGC TGTTCGACAT CGGCGTGGCC GGGCCGCTGG CCGGATTCGT CGTGGCGCTC
ATTGTGCTGT TCTATGCGCT GCTGACGCTC CCGCCGCCCA CGTACCTGCT GGACGTGCCC
GGCCACGAGG CGCTCAAGGC CTACATCCTG GCGCACGGGC GTTTTCCGTC CGCTCCGCTC
CCTTCCGAGG ACCCGACGAG CGTCACGCTC GTGCTGGGCC ACACGCTGCT GTTCGACACG
CTGGCCCGCT TTTTCCCGAA CGTGCCGCCC ATGTACGAGC TGTACCACTA CCCCACGCTG
TTTGCGGCCT GGCTGGGACT GTTCTTCACG GCCCTGAACC TGCTGCCGGT GGGCCAGCTC
GACGGCGGAC ATGTGCTCTA TGCGCTGTTC GGACGCCGCT GGCATCGGCG GCTGGCCCGA
GCCTTCGTCC TGCTGCTGCT CGTGTCGGCC ACGATCGGCT TTGCGCTGGA GACGCTTCCG
CCCCTGCTGC AGGAGGGCAT CTGGTGGCTG GAGCCGGCCG CCTGGTTCGG TCTGGCACTG
GTGCTTTACC TGTACCTGCA CCGGCTGTTC GACGGCGATC ACCGCATCGT GGCGCCCGTG
CTGCTGGGGC TGATGGTGCT GGCCGCGCTG GCGCCCCGCA TGGCCGGCCT CGTCGGCTGG
ATGGGACACA GCGGCTGGTT TCTCTGGAGC CTGATCATCC TGTACCTGAT CCGGGTCGAT
CACCCGCCCG TCTGGTACCG GGTGCCGCTT TCGCGTACGC GGCGGGCGCT GGGCTGGGCG
GCCATCGCGA TTTTCGTGCT CTGCTTCAGC ATTCGCCCGC TGTACCTGAT CTGA
 
Protein sequence
MEPIPGIRWR ETVAAPPRRP QRVWLHLLLF VLTLVTTTLT WPDWAGRWLL YERVGYGALL 
ADGLRFSLPL LLILTVHEFG HYLAARFHRI DATLPYYIPF PFNGIGTFGA VIRIREPIPD
TRSLFDIGVA GPLAGFVVAL IVLFYALLTL PPPTYLLDVP GHEALKAYIL AHGRFPSAPL
PSEDPTSVTL VLGHTLLFDT LARFFPNVPP MYELYHYPTL FAAWLGLFFT ALNLLPVGQL
DGGHVLYALF GRRWHRRLAR AFVLLLLVSA TIGFALETLP PLLQEGIWWL EPAAWFGLAL
VLYLYLHRLF DGDHRIVAPV LLGLMVLAAL APRMAGLVGW MGHSGWFLWS LIILYLIRVD
HPPVWYRVPL SRTRRALGWA AIAIFVLCFS IRPLYLI