| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_0215 |
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| Symbol | |
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| ID | 8566845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodothermus marinus DSM 4252 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013501 |
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| Strand | - |
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| Start bp | 227087 |
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| End bp | 229288 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_003289509 |
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| Protein GI | 268315790 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGGCGG CTGTGTTACG AGGGCTATTC CTGTTGCTAC TTGCGTGGAG TCTGGTCGGA
ACAGGACGTG CGCAGGATAC GAGGCGAATC GCTCCGCCAC TTCCGCTGGA ACGACTTCAG
GCGTATCCTT CCGAAGAAAT TCCCTTTGCC CGCCGGGTAC GGCTGCTCGG CGCCGGGCTG
GCGGGATTGC TTCCACCAGC CGACAGTCTG AGTGAAGCGG AGCTTCTCGA ATACCTGGCC
CGCCTGTACG ATCAACAGGC ACGTATTCTC AAAGCGGAAG CGGACGGCGA TCTGGATCAG
GCTGCCCAAC TCCTGGATGA AGCGCTGGAA GCCCTGGCCG CACTGAGTCG TCAGCCCGGC
ATCGAGGCGG ACGTCCGGTT TCGTGAACTG TACCGCTCGC TTCTTGTCGA ATACGAGCAG
CTCTACGGCA CGCCGCCGGA CACGCTGACG CTGAGCTACG GCGACATCTT CGCCTTCCGC
GAGGCCATGT TCGCGGCCAT GGAGACCGTA CGCGAGCCGC TGCTGGAAGA CGTTTTCACC
CCGAACCTCA CGGTCCCTGC CAGCTCGGTC CCGCTCACCA TGAACCGGCT CGTCAAAGCC
AGCATGGATT ATCTACTGCG CGAGCCGGAA AAGCACCTGC TGCGCTGGCT CAGCCGGGCC
GAAACCTACT TCCCGATGAT CGAGCAGATC TTCGAGGAAG AGGGCGTGCC GGACGAACTG
AAGTACCTGG CCATGATCGA AAGCGGGCTC AACCCCTATG CTCGGAGCCG GGCCGGCGCC
GTGGGCATGT GGCAGTTCAT GGCCGGAACG GCCCGCCTGT ACAACCTGAA TATTACGCCC
TGGGTGGATG AGCGACGGGA TCCGGAAAAA TCCACGCGGG CGGCCGCCCG TCACTTGAAG
GACCTGTACG CCATGTTCGG CGACTGGCAT CTGGCGCTGG CCGCTTACAA TGCCGGGGCC
GGTCGGGTCC AACGGGCACT CAATCAGGCC AGGATGCGCC ACGGCACAGG CCAGCTCACC
TTCTGGGACA TCTACCCGTA CCTGCCGCGC GAGACCCGCA ACTACGTGCC CATGTTTATT
GCGGCGGCGT TGGTGGCTTC CAATCCCGCC GCCCTGAACC TGACGGTCGA GCCGGGCCCG
CGCTACGAAT ACGACTACGT GCCCGTACAG GGCATGCTTT CTCTGGAAGA GATCGCGCAC
CTGGCCGGTA CCGACGTGGC CACGTTGCGC GCGCTGAATC CCGAACTGCG CCAAAACACG
CTACCGCCCA GCCGGGGTCC CTACTTCATC CGCCTGCCGC TGGGCAGCTA TGCACGCTTC
GCGGAGGCCT ACGCCCGATT GCCGGAAGAT CGTAAGCGGC CGGTCACGAC CTACACGGTG
CGTCGAGGCG ACGCGCTCAG CATCATTGCC CGGCGCTTCG GCGTGAGCGT CTCGGCCCTG
ATGCGGGCCA ACGGCCTGCA CAGCACGGTG ATTCGTCCGG GCCAGCGTCT GATCGTGCCG
GTCCCCCACT ACGAAAGCAC AAACGCCCTG CAACTGGCCG AGGCCAAGCC CGTCAGCGTG
CAGTACGGCA GCCGGGCCGT CCGCCCGCTC TACTCGACGC AACCCATCCC GCCCACGGCG
CCTGCTACCA CGGCACAACC GACCGCGCTG GAAACGTCCT CGGAGGAGCG CAACGAACCC
TCCCGTGAAA CCACATCGGC GACTACCGAG TCCCGGACGC CGGAAGCCCC CACGCGCGTC
GTGTACACCG TGCGTCGCGG GGACGCCCTC AGCGAAATCG CTCAGAAGTA CGGGGTCTCG
GTGGCCGACA TCAAACGCTG GAATAACCTC TCCGGCAACA CCATCCGCGT TGGCCAGGAG
CTGGTCCTCT ATCTCTCCGA GCCGGTCACG CCCGAGCGCG TGGTGTACAC CGTACGCCGG
GGCGACACGC TCAGCGAAAT CGCCCAGCGC TTCGGCGTTT CCGTGACCGC TATCAAACGC
TGGAACAACC TTGACGACAA TACCATCCAG ATCGGCCAGC GCCTGACCAT CTATCCGGAA
GCCGGCACCA CGCAGGGTTA TACCATCTAC CATGTGCGGC CCGGCGACAC GCTCAGCGAA
ATCGCCCAGC GCTTCGGCGT TTCGGTACGC GACATCCAGC GCTGGAATGG GTTGCGTTCC
AGCCGGATCT ATCCGGGCCA GCGCCTGAAA ATTTTCTCCT GA
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| Protein sequence | MRAAVLRGLF LLLLAWSLVG TGRAQDTRRI APPLPLERLQ AYPSEEIPFA RRVRLLGAGL
AGLLPPADSL SEAELLEYLA RLYDQQARIL KAEADGDLDQ AAQLLDEALE ALAALSRQPG
IEADVRFREL YRSLLVEYEQ LYGTPPDTLT LSYGDIFAFR EAMFAAMETV REPLLEDVFT
PNLTVPASSV PLTMNRLVKA SMDYLLREPE KHLLRWLSRA ETYFPMIEQI FEEEGVPDEL
KYLAMIESGL NPYARSRAGA VGMWQFMAGT ARLYNLNITP WVDERRDPEK STRAAARHLK
DLYAMFGDWH LALAAYNAGA GRVQRALNQA RMRHGTGQLT FWDIYPYLPR ETRNYVPMFI
AAALVASNPA ALNLTVEPGP RYEYDYVPVQ GMLSLEEIAH LAGTDVATLR ALNPELRQNT
LPPSRGPYFI RLPLGSYARF AEAYARLPED RKRPVTTYTV RRGDALSIIA RRFGVSVSAL
MRANGLHSTV IRPGQRLIVP VPHYESTNAL QLAEAKPVSV QYGSRAVRPL YSTQPIPPTA
PATTAQPTAL ETSSEERNEP SRETTSATTE SRTPEAPTRV VYTVRRGDAL SEIAQKYGVS
VADIKRWNNL SGNTIRVGQE LVLYLSEPVT PERVVYTVRR GDTLSEIAQR FGVSVTAIKR
WNNLDDNTIQ IGQRLTIYPE AGTTQGYTIY HVRPGDTLSE IAQRFGVSVR DIQRWNGLRS
SRIYPGQRLK IFS
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