Gene Rmar_0200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0200 
Symbol 
ID8566830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp212789 
End bp215080 
Gene Length2292 bp 
Protein Length763 aa 
Translation table11 
GC content60% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003289494 
Protein GI268315775 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACCGGA TCCTTGCAGG GCTTGTGCTG CTTTTCTGCG TCCCCGCCTT GGCTCAGCAT 
CTGCAGCCCC TTTCGCCCCG ACCCGAGCCG GACAGCTACA TCCTGCACGT GACCGACCGG
CTCAACCGCC GGCCGGAAGC CCGTCAGGCG CTGGAAGATT TTCACCGGCG CAAGGCGCTG
GGCCTGCCGC CGGCGACCCC GACCATCCAG GCGCCGCCGC AGGTGGGCGA TCGTCAGACG
TTCAAAGTGT ACAACTTTGA AACCGAAACG ACCGAATCCC GCGAGTTCGA GCTGCGCGTG
ATCGAAGACC GCTTCTACCT GTGGGTCGAA GTGGCCTCGC TCGACAGCGG CTGGGTGACC
GACGAGAAGC TGGAGGCGCT GCGGGCCGCG CTGGCCGACG CCACCCCGGC CGGCTCCATC
AATCCCAACC AGGGCATCAT CGCCAACGAC GAAGACGTTT TCGGCGACCC GCCCGACGTG
GACGGCGACG GTAAGACCGA CGTGCTGCTC GTGGACGTGC GCGACGGCTG GGATCCTGAA
AGCGGCGGCG GCTTTGTGGC GGGGTTTGTC TACAGTGGTG ATTTAAGCCC GCTCGGAGAC
GGCAACAACA AAGATATTCT GTATCTCGAC ACCAATCCCT CGCTTTCCAC CAACCGCCCC
ATCGAATCGC TCCTCTCGAC GGCCGCCCAC GAGTACCAGC ACCTGATTCA TTTCAACTAT
GATCTTGATG AGATCTCTTT TGTCAATGAG GGACTCTCCG AATGGGCCGA GGTGATGAAC
GGCTACGGCC GACGGGCCAT GAGCTACCTG AGCGACGTCT CCCGCTACAA CGTGCCCATC
TTCCGCTGGT CACAGGATAA CGTGAACGTG CTGGACGACT ACGAGCGTGC CGGACTGTTC
ACCACCTATC TGGAAGACCG GATCGGCTGG GAGGCCGTCG GTGCTATTGC GCGGGATCCG
TCCCACGGTT ATCTGGCCTA TGAAAATGCG CTGGTACCCC GGGGTCTGTC ATTCTATCAG
GTGCTGCTTG ACTTTCACAC TGCCAATTTT CTGAACGATC GCGCTGTCCA GGCAGCCTAT
GGCTACAGCC GCCCGGATTT TCAAAATGTA GGAGCTGCCC CCTCCGTAGT TTATAATGGC
CGCATTGCTA CGCAGACGCC CAACACCACC GTGCTGCTCT GGGGAGGCGG CGTGCTCTAC
CTGGTCTGGC AACACGTTAA AGATTTGCAG GTTGCTCTTT CCGGTCCTTC GCTGGCCATC
CGTGCGCTGC AGTACCCGGA AGGGGGCGGC ATCGTGGTCA GCGATCTGAA TCCTAGTGCA
TCTCCCTTCT CCTTCACCGG GGTGCACGAT CAGGTGGTAT TGATCGTCAC CCGCACTGCC
ACCTCTGGAA GCTCCCAGGT GACCTATAGT GCCACCTGGC GCTCAGATCA GACTTTCACC
AGCCAGATCA TCCAGTTCGA TAACGGCCAG GTCCTGCAAC CCTTCGTTCT CTCCGATGGT
CTGGAGCTGC TCACCCGCTT TGAAAATCCA CAACCGGGCT ATACGCTACT AGGCCGTGTC
TTTCTGCCAC TGCACTTCTA CAGCCAGTTT AGCAACGGTC CTCCTCGCAC GGCGCCGCGA
GATTTCACGC TAACGGTGCG AACAGCCAAT CCAGACGGTA CGCCTGGTCC GGTGCTCTTC
GAAAAGATCT TCGACGATCC ACGGCCCTAT CAACAGGTAT CGTCGCTTAT CATTCAATTT
GTTGAGATCG ATCTGTTTCC TTACGCCGCC CAGATTGGGG ACCTACCCGA CACGCTGTTT
ATTGGCTACC GGGATGCCGG CACCGACACG AACTCCGTTG TTCTGGCCAC TTCCAGCTAT
GCTATTGAAA ATCGATCGTT CATCGGGCCG ATCCAGGGAA GCTGGCGTGC ACTCTGGGAA
ACAACGCTTA ACGATGGAAC CTCCCTGAAC GGTCGCATCA TCCCTATCCG GCTCGAGTTT
CTGGTCGGGA GCGAACCAGT ACCGGCCGAA CCGGTTGCCA AGCTCCCCCG TGAGCTGGCG
CTGGAGCCGC CTTATCCCAA CCCGTTCCGC ACAACAGTGC GGTTGCGCTA CCACCTGCCG
GAGACCGGTC TTGTGCGACT GCGCGTGTAT GACCTGCTGG GCCGACCGGT GGCCACGCTG
GTCGACGGTC CACAGCCGGC CGGCACCCAC ACGGTACGTC TGGATGCCAG TGGCTGGGCC
AGCGGCCTGT ATCTGTGCGT GCTGGAGGCA TCCGGCCAAC GACGCATCCA GCGGCTGCAG
GTAGTGCGCT GA
 
Protein sequence
MYRILAGLVL LFCVPALAQH LQPLSPRPEP DSYILHVTDR LNRRPEARQA LEDFHRRKAL 
GLPPATPTIQ APPQVGDRQT FKVYNFETET TESREFELRV IEDRFYLWVE VASLDSGWVT
DEKLEALRAA LADATPAGSI NPNQGIIAND EDVFGDPPDV DGDGKTDVLL VDVRDGWDPE
SGGGFVAGFV YSGDLSPLGD GNNKDILYLD TNPSLSTNRP IESLLSTAAH EYQHLIHFNY
DLDEISFVNE GLSEWAEVMN GYGRRAMSYL SDVSRYNVPI FRWSQDNVNV LDDYERAGLF
TTYLEDRIGW EAVGAIARDP SHGYLAYENA LVPRGLSFYQ VLLDFHTANF LNDRAVQAAY
GYSRPDFQNV GAAPSVVYNG RIATQTPNTT VLLWGGGVLY LVWQHVKDLQ VALSGPSLAI
RALQYPEGGG IVVSDLNPSA SPFSFTGVHD QVVLIVTRTA TSGSSQVTYS ATWRSDQTFT
SQIIQFDNGQ VLQPFVLSDG LELLTRFENP QPGYTLLGRV FLPLHFYSQF SNGPPRTAPR
DFTLTVRTAN PDGTPGPVLF EKIFDDPRPY QQVSSLIIQF VEIDLFPYAA QIGDLPDTLF
IGYRDAGTDT NSVVLATSSY AIENRSFIGP IQGSWRALWE TTLNDGTSLN GRIIPIRLEF
LVGSEPVPAE PVAKLPRELA LEPPYPNPFR TTVRLRYHLP ETGLVRLRVY DLLGRPVATL
VDGPQPAGTH TVRLDASGWA SGLYLCVLEA SGQRRIQRLQ VVR