Gene Rmar_0116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0116 
Symbol 
ID8566741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand- 
Start bp126321 
End bp127007 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content65% 
IMG OID 
ProductThiJ/PfpI domain protein 
Protein accessionYP_003289412 
Protein GI268315693 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGACGCG TTCTGTTCGT CGTTACGAAT CATAGCGAGC TGGGTAGCAC GGGGCAGAAG 
ACGGGCTATT ATCTGTCGGA GGTGGCCCAC CCGTTCCACG TGCTGCACGA GGCCGGCTAC 
GAGATCGACT TCGTCAGCCC GAAGGGCGGC AAGGCCCCCA TGGATCCGAA GAGCTACAAG 
CTGGACGACC CGATCAACAA GGCCTTCTGG GAAACGCACG GCAAGCGGCT GGATGAGACG 
CTGGCGCCCG AACAGGTCGA TCCGTCCCGT TACGTGGCGA TCTTCTACGC GGGCGGACAC 
GGCACGATGT GGGACTTTCC CGAAAGCGAG GCGATCGCCC GCATCGCGGC CAGCATCTAC 
GAACGGGGTG GCGCCATCGG CGCCGTGTGC CATGGGCCGT CCGGCCTGAT CCCGATCAAG 
CTCTCCAACG GGCGGCCGCT CGTCGAAGGG CGCCGGATCA ACTCGTTCAC GAACGAAGAG 
GAGCAGGCCG TCCAGCTGGA CAAGATCGTG CCCTTCCTGC TGGAGACGCG CCTGAAGGAG 
CTGGGCGCCA TCCATGTGTC GGTGAAGAAC TTCGCCGCTC ACGTGGAGGT GGACGATCGA 
ATCGTGACGG GCCAGAATCC AGCCTCGGCC GAAGGGGTGG GCCGCGCGCT CGTCGAAGTC 
CTGAATCGCC TGAGCGTGCC GGCCTGA
 
Protein sequence
MGRVLFVVTN HSELGSTGQK TGYYLSEVAH PFHVLHEAGY EIDFVSPKGG KAPMDPKSYK 
LDDPINKAFW ETHGKRLDET LAPEQVDPSR YVAIFYAGGH GTMWDFPESE AIARIAASIY 
ERGGAIGAVC HGPSGLIPIK LSNGRPLVEG RRINSFTNEE EQAVQLDKIV PFLLETRLKE 
LGAIHVSVKN FAAHVEVDDR IVTGQNPASA EGVGRALVEV LNRLSVPA