Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_0112 |
Symbol | |
ID | 8566737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | - |
Start bp | 123482 |
End bp | 124618 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | histone deacetylase superfamily |
Protein accession | YP_003289408 |
Protein GI | 268315689 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.833129 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTCCCCG TCGTCTATCA CCCCGACTAC CTGACCTACT GCTTCGGCCC GGAGCACCCG TTCAGCCCGG TGCGCCTGGA AATGCTCTGG ACGCTCCTGG AAGCGCTGGG CTGCGCGCCG ACGCCGATCC GGCCGCCGGA AGCCACGCGG GCGGACGTGC TCCGCGTGCA CGCCGAGGAC TACGTGGCGC GCGTCGAGGC GGCCTCGCGC GGCGAATACG TGCCCGATGC CGAGGCGTTC GGCCTCGACA CACCCGACGT GCCCGTGTTT CCCGACATGG ACCGGGCCGC CCGCATACTG GTAGGCGGCA CGCTGCACGG CGCCCGCCTG ATCGCCGATG GCCGGGCCAC TACCGTGCTC CAGCTCGGCG GTGGCTTTCA CCACGCCCAC CCGGCCCGCG CCTCGGGCTT CTGCGTCTAC AACGACCTGT CCATCGCCAT CCGGGCGCTG ACCGACGCCG GACTGCGCGT GGCCTACATC GACATCGACG TCCACCACGG CGACGGCGTG CAGGCCATCC ACTACCGGGA AGACACGGTG CTGACGATCA GCCTGCACGA AACCGGCCAG TACCTGTTTC CGGGCACAGG CTTCATCGAC GAGATCGGCG AGGGCCGCGG CCAGGGCTTT TCGTTGAACG TGCCGCTTCA GCCGTTTACC GACGACGAAA GCTACCTGGA GGTCTTCGAG CGCGTCGTGC CTCACGCGCT CGTGATGTTT CGGCCCGACG TGCTCGTCGT CCAGTGCGGC GCCGACGCCC ACTTTCAGGA CCCGCTGGCC GACCTGCTGC TCTCGACGCG CGCCTACGAG CAGCTCTTCC GACGCCTGAA AGCGCTGGCC GACGAACATA CCGGCGGCCG TGCACTCTTT ACGCTGGGCG GCGGCTACGA CTTCGACGCC ACGGTACGCG TCTGGGCCCT GCTGTATCTG GTCCTGCAGG ACCGACCGTT TCCGGAGCGG CTTCCTCTTA GCTGGCGCAT CGAATGGGAA CAGCGCCTGG AGCGCCCCCT TTCACCCACG CTGCACGACA CGGCCCGGCC GCTCACGCTC ACGCCCGAAC GCCGCCGCCA GATCGCCCAG CAAAACCTGC ACACGGCTCG ACGCCTCATG GACACCCTCG CCTATTACTG GTACTGA
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Protein sequence | MVPVVYHPDY LTYCFGPEHP FSPVRLEMLW TLLEALGCAP TPIRPPEATR ADVLRVHAED YVARVEAASR GEYVPDAEAF GLDTPDVPVF PDMDRAARIL VGGTLHGARL IADGRATTVL QLGGGFHHAH PARASGFCVY NDLSIAIRAL TDAGLRVAYI DIDVHHGDGV QAIHYREDTV LTISLHETGQ YLFPGTGFID EIGEGRGQGF SLNVPLQPFT DDESYLEVFE RVVPHALVMF RPDVLVVQCG ADAHFQDPLA DLLLSTRAYE QLFRRLKALA DEHTGGRALF TLGGGYDFDA TVRVWALLYL VLQDRPFPER LPLSWRIEWE QRLERPLSPT LHDTARPLTL TPERRRQIAQ QNLHTARRLM DTLAYYWY
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