Gene Rmar_0112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0112 
Symbol 
ID8566737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp123482 
End bp124618 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content68% 
IMG OID 
Producthistone deacetylase superfamily 
Protein accessionYP_003289408 
Protein GI268315689 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.833129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTCCCCG TCGTCTATCA CCCCGACTAC CTGACCTACT GCTTCGGCCC GGAGCACCCG 
TTCAGCCCGG TGCGCCTGGA AATGCTCTGG ACGCTCCTGG AAGCGCTGGG CTGCGCGCCG
ACGCCGATCC GGCCGCCGGA AGCCACGCGG GCGGACGTGC TCCGCGTGCA CGCCGAGGAC
TACGTGGCGC GCGTCGAGGC GGCCTCGCGC GGCGAATACG TGCCCGATGC CGAGGCGTTC
GGCCTCGACA CACCCGACGT GCCCGTGTTT CCCGACATGG ACCGGGCCGC CCGCATACTG
GTAGGCGGCA CGCTGCACGG CGCCCGCCTG ATCGCCGATG GCCGGGCCAC TACCGTGCTC
CAGCTCGGCG GTGGCTTTCA CCACGCCCAC CCGGCCCGCG CCTCGGGCTT CTGCGTCTAC
AACGACCTGT CCATCGCCAT CCGGGCGCTG ACCGACGCCG GACTGCGCGT GGCCTACATC
GACATCGACG TCCACCACGG CGACGGCGTG CAGGCCATCC ACTACCGGGA AGACACGGTG
CTGACGATCA GCCTGCACGA AACCGGCCAG TACCTGTTTC CGGGCACAGG CTTCATCGAC
GAGATCGGCG AGGGCCGCGG CCAGGGCTTT TCGTTGAACG TGCCGCTTCA GCCGTTTACC
GACGACGAAA GCTACCTGGA GGTCTTCGAG CGCGTCGTGC CTCACGCGCT CGTGATGTTT
CGGCCCGACG TGCTCGTCGT CCAGTGCGGC GCCGACGCCC ACTTTCAGGA CCCGCTGGCC
GACCTGCTGC TCTCGACGCG CGCCTACGAG CAGCTCTTCC GACGCCTGAA AGCGCTGGCC
GACGAACATA CCGGCGGCCG TGCACTCTTT ACGCTGGGCG GCGGCTACGA CTTCGACGCC
ACGGTACGCG TCTGGGCCCT GCTGTATCTG GTCCTGCAGG ACCGACCGTT TCCGGAGCGG
CTTCCTCTTA GCTGGCGCAT CGAATGGGAA CAGCGCCTGG AGCGCCCCCT TTCACCCACG
CTGCACGACA CGGCCCGGCC GCTCACGCTC ACGCCCGAAC GCCGCCGCCA GATCGCCCAG
CAAAACCTGC ACACGGCTCG ACGCCTCATG GACACCCTCG CCTATTACTG GTACTGA
 
Protein sequence
MVPVVYHPDY LTYCFGPEHP FSPVRLEMLW TLLEALGCAP TPIRPPEATR ADVLRVHAED 
YVARVEAASR GEYVPDAEAF GLDTPDVPVF PDMDRAARIL VGGTLHGARL IADGRATTVL
QLGGGFHHAH PARASGFCVY NDLSIAIRAL TDAGLRVAYI DIDVHHGDGV QAIHYREDTV
LTISLHETGQ YLFPGTGFID EIGEGRGQGF SLNVPLQPFT DDESYLEVFE RVVPHALVMF
RPDVLVVQCG ADAHFQDPLA DLLLSTRAYE QLFRRLKALA DEHTGGRALF TLGGGYDFDA
TVRVWALLYL VLQDRPFPER LPLSWRIEWE QRLERPLSPT LHDTARPLTL TPERRRQIAQ
QNLHTARRLM DTLAYYWY