Gene Rmar_0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0106 
Symbol 
ID8566731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp117816 
End bp118994 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content73% 
IMG OID 
Product8-amino-7-oxononanoate synthase 
Protein accessionYP_003289403 
Protein GI268315684 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.209917 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTGGC TCACCCGGCA ACTCCGGCAG CTTGAGGCGA AAGGACTGCG CCGCACGCTC 
CGGCCGCTTG CGGCCGGTCC GTACGTGGAA CGTGACGGCC GCCGCCTGCT GAACCTGGCC
TCGAACGACT ACCTGGGGCT GAGCACGGAT CCGCGTCTGA CGGCGGCCGC CCGCGAGGCG
CTGGAGCGCT GGGGTGTCGG GGCCGGGGCC GCCCGGCTGG TGGTGGGCGA CCGCCCCGTG
CACGAAGCGC TCGAGGCGGC CCTGGCCGCC CTCAAGGAAA CCGAAGCCGC CCTGGTGTTT
CCGAGCGGCT ATGCGGCCAA CGTGGGCGTG CTCTCGGCAC TCGCGGGTCC GCGCGACCAG
ATCTTTGCGG ACGCGCTCAA CCACGCCAGC CTGAACGACG GCGCCCGGCT CAGCCGCGCC
CGCTTCCGCT ACTACCGCCA CCGCGACCTG GAGCAACTCG AGCGGCTCCT GCAGGGGCCC
GGACCGGCCC CGGGCGGCCG CCGCTTCATC GTGACGGATG CCATCTTCAG CATGGACGGC
ACGGTGGCGC CGCTTCCGGA GCTGGCCGAA CTGGCCGCCC GCTACGACGC CGTGCTCGTC
GTGGACGACG CGCACGGCAC CGGGATCGTG GGCCCCGAAG GCCGGGGCAC CGCCCATCAT
CTGGGCGTGG CCGATCGGAT TCCCGTGCAG GTGGCCACGC TCTCGAAGGC GCTGGGCGTG
CAGGGAGGCG CCGCGCTGGG ATCGCGGGCG CTCGTCGACT ACCTGCTGCA CCGCGCCCGC
GCCTTCATCT ACAGCACGGG GATTTCGCCC GTGCTGGCCG CTGCGGCGCT GGAGGCCGTC
CGCCTGGTGC AGTCCGACGA AGGCGCGCGG CGACGGCACC GGCAACAGGC GCACGTTGCC
CGCCTGAAGG CCGGGCTCGA AGCCCTGGGC TACACGGTCC GGCACGAACC ACCGGCGCCC
ATGCTGGCCG TGCTGGTGGG TGCGCCCGAG GCGGCATTGC GTCTGTCGGC TATGCTGGAA
ACGCGCGGCG TGCTCGCCCC GGCCATTCGG CCGCCGACGG TGCCGCCCGG CACCAGCCGG
ATCCGACTGG CCCCCATGGC CACGCACACC GACGACGACA TCGAGGCGGC TCTGGCCGCC
TTTCCCGAAG CCGAAGCGAT CCAGCCCCAT GTTGCCTGA
 
Protein sequence
MEWLTRQLRQ LEAKGLRRTL RPLAAGPYVE RDGRRLLNLA SNDYLGLSTD PRLTAAAREA 
LERWGVGAGA ARLVVGDRPV HEALEAALAA LKETEAALVF PSGYAANVGV LSALAGPRDQ
IFADALNHAS LNDGARLSRA RFRYYRHRDL EQLERLLQGP GPAPGGRRFI VTDAIFSMDG
TVAPLPELAE LAARYDAVLV VDDAHGTGIV GPEGRGTAHH LGVADRIPVQ VATLSKALGV
QGGAALGSRA LVDYLLHRAR AFIYSTGISP VLAAAALEAV RLVQSDEGAR RRHRQQAHVA
RLKAGLEALG YTVRHEPPAP MLAVLVGAPE AALRLSAMLE TRGVLAPAIR PPTVPPGTSR
IRLAPMATHT DDDIEAALAA FPEAEAIQPH VA