Gene Rmar_0100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0100 
Symbol 
ID8566725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp111302 
End bp112435 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content65% 
IMG OID 
Product2-methylcitrate synthase/citrate synthase II 
Protein accessionYP_003289397 
Protein GI268315678 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGAGA CGACCGAAGT AAAAAAAGGA CTGGCCGGCG TCATTGCCGA CGAATCGGCC 
ATTTCGAACG TCATTCCCGA GAAGCGCGCG CTCTATTACC GGGGCTATCC GGTGCACGAG
TTGGCCGAAA AATGCCGCTT CGAGGAGGTG GCCTACCTAC TGCTCTACGG CGAGCTGCCC
ACGCGGGCAC AGCTCGAAGC CTTCGAGCAG GAGGAGCGAA GCCAGCGCGC ACTGGATGAA
ACCGTCCATC GCCTGCTGGA GCTGATCCGG ACAGACGCCG CCCCCATGGA CGTGCTCCGC
ACGGCCGTCA GCCTGCTCGG CGCGAACGAT CCGGAGGCCA CTGGCGCCGA CATCGACACG
ATCCGCCGCA AAGCCATCGG GCTGATGGCC AGACTGCCCA CCATCGTGGC GGCCGACCGC
CGGCGCCGGC ACGGCCTGGA CTTCATCCCG CCGCGCGAGG ACCTGACCTT CGCCGAGAAC
TTCTTCCACA TGTACTTCGG CGAGGTGCCC GACGCCGAGG TGGTCAAGGC CTTCGACGTG
TCGCTGATTC TGTATGCGGA GCACAGCTTC AACGCTTCCA CCTTCACGGC CCGCGTGATC
ACCTCGACGC TGTCGGACTA CTACAGCGCG ATCACGGGGG CCATCGGTGC GCTCAAAGGA
CCGCTGCACG GCGGGGCGAA CGAAGAGGTC ATGCGTATGC TCAAGCCCTT CCGCTCGCCG
GAGGAAGCCC GTCGGTGGGT GGAGGAAGCC CTGGCCCGTA AGCAGAAGAT CATGGGCTTC
GGACACCGCG TCTACCGCTA CGGCGACTCG CGCGTGCCCA TCATGGAGCG CTACACGCGC
CGGCTGGCCG AGCGCCTGGG CTTCCAGAAC CTCATGGCCA TCTACGACGC CATCCAGGAA
GTCGTCGTGC AGCAGAAGGG CATCTACCCG AACCTGGACT ATCCGACCGG CCCGGCCTAC
TACATGATGG GCTTCGACAT CGAGACCTAC ACGCCGATTT TCGTGATGAG CCGCATCACG
GGCTGGTCGG CACACGTGAT GGAGCAGCTG GCCGACAACC GGATCATCCG GCCGCTGAGC
CGCTACGTGG GGCCGCCCGA ACGCCCGGTG CCACCTCTGG AAGCGCGGGG ATGA
 
Protein sequence
MAETTEVKKG LAGVIADESA ISNVIPEKRA LYYRGYPVHE LAEKCRFEEV AYLLLYGELP 
TRAQLEAFEQ EERSQRALDE TVHRLLELIR TDAAPMDVLR TAVSLLGAND PEATGADIDT
IRRKAIGLMA RLPTIVAADR RRRHGLDFIP PREDLTFAEN FFHMYFGEVP DAEVVKAFDV
SLILYAEHSF NASTFTARVI TSTLSDYYSA ITGAIGALKG PLHGGANEEV MRMLKPFRSP
EEARRWVEEA LARKQKIMGF GHRVYRYGDS RVPIMERYTR RLAERLGFQN LMAIYDAIQE
VVVQQKGIYP NLDYPTGPAY YMMGFDIETY TPIFVMSRIT GWSAHVMEQL ADNRIIRPLS
RYVGPPERPV PPLEARG