Gene Rmar_0099 details

Gene Information

• Locus tag: Rmar_0099
• ID: 8566724
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: -
• Start bp: 108811
• End bp: 110880
• Gene Length: 2070 bp
• Protein Length: 689 aa
• Translation table: 11
• GC content: 64%
• Product: hypothetical protein
• Protein accession: YP_003289396
• Protein GI: 268315677

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCCTGC TGGGGCTCTG GCTGGCGCTG AGCACGACGC TGCAGGCCCA ACCGGTGCCG 
CTCTTTGAAG AAGTGGCGGC TTCGCTGCAG GCGCTCGGGC CGCAGGCCCA ACAACGCCAA 
CAGGTGTTGC AACGCCTCCC GATGGTGACG CAGCTTCAGG TGGTGCGGCT TCCGGCGCAA 
CTCTGGCGCT ATCGTTCATT CGAGCTGGCG GTGAACGCGG CGGGACGGCT GGTGCCGGGT 
CGGGGCAAGG GGCTCGGCAC GTTGACGGTG CGGCGTGGAG AACTTTCGGT ACTTTCGGAG 
GAGGCGGTGG CCTGGAACGG GCGGATTTAC GTGGGTATGG ACACGTCGGA GGCGGTGGGC 
GAGGTGTCTT TGGTGGTGTT GCGGACGGGT GCGGTGACGG GCCAAGTGCT GCTGGGCGAT 
GCGGAGTACT GGGTGCGGCC GCTGGGTGGT GGGCTGCACG CACTGGTGAC GATCGACCCG 
TCGAAGTATC CGAAGGAGCG GCCGACGAGT CCGTACCATG ACGGTGGTGG CCCTGGCGAG 
GCGGGGTTGA ACGATGCGGC GGAGTCGGTA CAGCCCGAAA AAGCCGTAGA GCAGGAGACA 
CAGGCGTTTG TAGGAAGCTG CGCGCAGGAG GAAGCGTTGG GTGCGGGTGC GGTGGTGCAG 
AGTCGTTGTA GTCCGGAGGT GGTGCGGGTG CTGGTGCTCT ACACGCCGGC GGCGGCGCAG 
GGTCGGGACA TCGACGGGAT CATTTATGCG GCCATTAACG ACGCAAACCA GGCCTACTAC 
AACAGCCGGA TCAATGATCG GCTTCCAGCC AACCGACTGA AGCTGGAACT GGTCCACAAA 
CAGTCATTTA GTTTCACAGT TCAAAACATC CCTACAGATG ACGTTGAGCG ATTAGCAGGC 
GATGCGCAAG CGCGAGCGTT GCGGGACCAG TACCAGGCGG ATGTGGTGGT GCTGCTGATC 
GATGATAATG AAGGCTCAGG GGGGTGGTCG ACTACGCTCG GCGTAGCCGG TGCCATCCCG 
CACGGGAGCT CGGGCGAGGC AATCGTCAAT GTGAGCGAGG TAAACCAGAA GGCCTACGCG 
ATTGTGAAGG TAAGCTATGC CAGTGGTGGC CGCTATACGC TGGCACACGA GATCGGGCAC 
ATCCAGGGGG CGCAGCATCA CCCGGACGAT CCGATCGATC CGCAGGGCAT CCCCTATGCG 
CGGGGGCACC GGTTTGTGGC CCCGGTTATT CGGTGCATCA ATGATCCGCC CTATGGCCGC 
CGGTGTTTTC AGGAGTACAC CTACAATGCC ACGGTCATGG CCTACACGCC CTGGCCGTAT 
GTGCGTATCA AGCACTTTTC AAATCCCGAG GTGATGTACT ACGGTGTCTT TACGGGTCGG 
TCGGATCGGA ACAATGCGCG CGTGTTGCGG GAGACAGCCG ATATGGTGGC CGACTTTCGG 
GATCCGAACG AACTGCGGGC CACGTTTTTC TACACGTCGG ACAACTTCCC CTACGAGGGC 
AGCTACACGT TCACGGCGCA GCCCTGCGGC GGGCGGGGCA CGCTGAGCTA CCAGTGGCGC 
AAGTGTGCCG ATCCCTTCAC CTGTGGGCCG GTGCTGGGCA CTGGGGCGAC GTTCACGACC 
TATCTGGCGC CGGGATCGAA CTACATTCAG CTAACGGTGC AGAGCAGCGC GGGGCAGGCG 
TACACCGTGT TGCGGGAGGT GTACGTGCTG GATTCGAGCT GTGGAGAAGA GATTTTCTGT 
GCGCAGGCGG TGGGTGGTGA TACGCTGCAG GTGGTGCAGG AGCGGTTGTC GGCGGAGCGA 
TTGCCGGCGG AGCCGGAGCT TGAGGGGTTG TATCCGAACC CGGCGGGGGA TCGGGTGGTG 
GTGCGGTTCG GGTTGCCGGA GGCGTCGGAG GTGGAGCTTA TGGTTTACGA CGTGCTGGGT 
CGGGCGGTGG TGCGTCGGCG GCCGGGTCGC ATGGAGGCGG GCTGGCATCG GGAGGTGCTG 
ATGACAGACG GATGGCCGGC GGGGCGCTAC GTGGTGGTGC TGCGGGTTGG CGAACGGACG 
CTCAGCAAGA CGCTGATGCG GATTCGGTAA 

 

Protein sequence

MLLLGLWLAL STTLQAQPVP LFEEVAASLQ ALGPQAQQRQ QVLQRLPMVT QLQVVRLPAQ 
LWRYRSFELA VNAAGRLVPG RGKGLGTLTV RRGELSVLSE EAVAWNGRIY VGMDTSEAVG 
EVSLVVLRTG AVTGQVLLGD AEYWVRPLGG GLHALVTIDP SKYPKERPTS PYHDGGGPGE 
AGLNDAAESV QPEKAVEQET QAFVGSCAQE EALGAGAVVQ SRCSPEVVRV LVLYTPAAAQ 
GRDIDGIIYA AINDANQAYY NSRINDRLPA NRLKLELVHK QSFSFTVQNI PTDDVERLAG 
DAQARALRDQ YQADVVVLLI DDNEGSGGWS TTLGVAGAIP HGSSGEAIVN VSEVNQKAYA 
IVKVSYASGG RYTLAHEIGH IQGAQHHPDD PIDPQGIPYA RGHRFVAPVI RCINDPPYGR 
RCFQEYTYNA TVMAYTPWPY VRIKHFSNPE VMYYGVFTGR SDRNNARVLR ETADMVADFR 
DPNELRATFF YTSDNFPYEG SYTFTAQPCG GRGTLSYQWR KCADPFTCGP VLGTGATFTT 
YLAPGSNYIQ LTVQSSAGQA YTVLREVYVL DSSCGEEIFC AQAVGGDTLQ VVQERLSAER 
LPAEPELEGL YPNPAGDRVV VRFGLPEASE VELMVYDVLG RAVVRRRPGR MEAGWHREVL 
MTDGWPAGRY VVVLRVGERT LSKTLMRIR