Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_0096 |
Symbol | |
ID | 8566721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 106883 |
End bp | 107431 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | alkylhydroperoxidase like protein, AhpD family |
Protein accession | YP_003289393 |
Protein GI | 268315674 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAACGCT GCGAAGCAAT TCGACAGACC GTTCAGCAGA AGTTCGGTTT CGTCCCGCAG CTTTTCGAGG AGCTGCTCCG TACAAATCCG GCCGTCGCCG AAGCCTACCT GCAGGCCGGT GCGGCGTTGC AGCAGGGGGT GCTCAGCCCG CCGGAGCAGC AGATCGTGCA GCTCACCGTG GCCGCCTGGA ACGCCTGTCA TTACTGCACG GCCGCGCACG GCACCGCCGC GCTCGGCATG GGACTGTCGC CCGAAACTGT GGACGCGATC CTGGAGGGCC GTCTTCCGGA AGACGAGCGG CTGGCGCTGC TGGTGGAGGC GACCCGAGCG GTGCTGGAGC GCCGCGGCTG GCTCGATGAG GACGCATTGC AGAAGCTGGA GGCACGCGGC CTCGACCGCG CCGCGCTCTA CGAGATCATC GCGCTCATCG GCGTCAAGAC GATTACGAAC TACATCAACC ACCTGGCGCA TACGCCGGTG GATGAAGTCT TCCGACCCGT CACCGAGCGC ACGGCCTACC GGCGCCTGGT GGAAAGCACA ACGGTTTGA
|
Protein sequence | MERCEAIRQT VQQKFGFVPQ LFEELLRTNP AVAEAYLQAG AALQQGVLSP PEQQIVQLTV AAWNACHYCT AAHGTAALGM GLSPETVDAI LEGRLPEDER LALLVEATRA VLERRGWLDE DALQKLEARG LDRAALYEII ALIGVKTITN YINHLAHTPV DEVFRPVTER TAYRRLVEST TV
|
| |