Gene Rmar_0090 details

Gene Information

• Locus tag: Rmar_0090
• ID: 8566715
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: +
• Start bp: 102297
• End bp: 103082
• Gene Length: 786 bp
• Protein Length: 261 aa
• Translation table: 11
• GC content: 65%
• Product: phage shock protein A, PspA
• Protein accession: YP_003289387
• Protein GI: 268315668

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGCTCT GGGCCCGATT CAAACGGTGG ATTCGCTCGA TCTTCGGCGG GGCCATCTCC 
GCGCTCGAAG ATCCCCGCCT CATTCTGGAG CAGAACATCC GGGAGCTGAA CGATCAGATC 
CCGAAGATGA ACGAAAACAT CGCCACGGTG AAGGCGAACG TGCTGCTGCT CCAGAAGGAG 
GTGCGGCGTA ACGAGCAGGA GATCGAGCGA CTGGTGGCCC GTATCAAGGC GGCCATTCAG 
GCCGGCCGCG ACGACATCGC GCAGCAGTAC GCCATTCAGC TCCAGAAGGC GAAAGAGACG 
CTGGCGCGCA CGAAGGAGCA ACTGCAATAT GCCGAGGCCG CCTACGAGAA GGCGCTCCAG 
GTGAAACAGG CCTTCCTTCG CGAGAAGGAA CGCAAGATTC AGGAAGCGAA GGAAGCCCTG 
CGCGCGCACG AGCGGGCCAA GTGGCAGGCG AAGGTGGCCG ACGCGTTGGA GCAGTTCGAG 
GTGGGCGGAC TGGACCAGAC GCACGAGGAG ATGGTCCAGC GCCTTCGCGA GGAGACAGCC 
CGGAGCGAGG CGCGCCTGGA GCTGGCGCTC GACAGCGTCG ATGCCGACGC GCTGAAGATC 
GAAGCCGACG CCGAGGCGCT CCGGGCGGCC GAGCTGGTGC GCCAGTTCAA GCTGGAGATG 
GGCCTGCTGG AGCCCGAGCA GAAACCGGCC CTGGAGTCGC CCGCCCGCGA GGCGGAGCAG 
GAAGCTCCCG AACAGGCCCG CGAAACGGAA GAGACGAAAA CCATCGGCCG CCAGCGCACC 
CGCTGA 

 

Protein sequence

MSLWARFKRW IRSIFGGAIS ALEDPRLILE QNIRELNDQI PKMNENIATV KANVLLLQKE 
VRRNEQEIER LVARIKAAIQ AGRDDIAQQY AIQLQKAKET LARTKEQLQY AEAAYEKALQ 
VKQAFLREKE RKIQEAKEAL RAHERAKWQA KVADALEQFE VGGLDQTHEE MVQRLREETA 
RSEARLELAL DSVDADALKI EADAEALRAA ELVRQFKLEM GLLEPEQKPA LESPAREAEQ 
EAPEQARETE ETKTIGRQRT R