Gene Rmar_0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0048 
Symbol 
ID8566672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand+ 
Start bp49085 
End bp49639 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content69% 
IMG OID 
Producttranscriptional regulator, LuxR family 
Protein accessionYP_003289345 
Protein GI268315626 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.426983 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGGACG ACCTGCAAAC GCTCTGCCGG CGGTTGGTTG ATTCGGACCG TGCGGCGCTG 
GAGGAGCTGT TTCGCCGCAT GCGCGAGCCG CTCCTGCGCT ACGTCTGTGC CATCGTGGCG 
GAGGCCACCG TGGCGCACGA TCTGGTGCAG GACGTGTTTC TGGATCTGTG GCTGCGGCGG 
ACCACGCTCG ATCCGGAGCA ACCGCTGCGG CCCTATCTCT ACCGCATGGC CCGCAACCGG 
GCACTCCGGC ACCTGCGTGA CGAGCGCCGG CGGGCCCGTA AGCGTGCCGA GCAATTGCCG 
AAGACGCCGC CGGTCGAGCC GCTGTCGCCG GACGATCATG TGGCGTCGCG CCAGCTCGAA 
ACGCTGCTGG CGCGCTGGCT CGACGAACTC CCCGAGCGCC AGCGCGAGGT GCTGGTGCTC 
AGCCGCTGGC ACGGGCTGAG CCATCGCGAG ATCGCCCGCG TCATGGGCAT CTCGCCCCGA 
ACCGTCAACA ACCACATGTT GCGGGCGCTG GAGACGCTGC GCCGTCGGAT CCAGGCGCTC 
GCCCTTACGC CATGA
 
Protein sequence
MTDDLQTLCR RLVDSDRAAL EELFRRMREP LLRYVCAIVA EATVAHDLVQ DVFLDLWLRR 
TTLDPEQPLR PYLYRMARNR ALRHLRDERR RARKRAEQLP KTPPVEPLSP DDHVASRQLE 
TLLARWLDEL PERQREVLVL SRWHGLSHRE IARVMGISPR TVNNHMLRAL ETLRRRIQAL 
ALTP