Gene Rmar_0047 details

Gene Information

• Locus tag: Rmar_0047
• ID: 8566671
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: +
• Start bp: 46961
• End bp: 49024
• Gene Length: 2064 bp
• Protein Length: 687 aa
• Translation table: 11
• GC content: 65%
• Product: excinuclease ABC, B subunit
• Protein accession: YP_003289344
• Protein GI: 268315625

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.63144
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGGGAG CGGTTGAAAA CCGGAAGTTC GAGCTGGTAG CGCCGTTCGA GCCGACCGGC 
GATCAGCCCC GCGCCATCGC GGAGCTGACC GAGGGTATCC TGCGCGGCGA CAAATACCAG 
ACCCTGCTGG GCGCGACCGG CACGGGGAAG ACTTTTGTGC TGTCGCACGT CATTCAGAAC 
GTGCAGCGGC CGACGCTGGT GATGAGTCCC AACAAGACGC TGGCCGCACA GCTCTACGGC 
GAGTTCAAGC AGTTTTTCCC CAACAACGCG GTCGAGTTTT TCATCTCCTA CTACGACTAC 
TACCAGCCCG AGGCCTACAT CCCGGCCACC GATACCTACA TCGAAAAGGA CCTGGCCATC 
AACGAGCGGA TCGATCGGCT GCGCCTGCGG GCCACCAGTG CGCTCGTCTC GGGTCGGCGC 
GACGTGATCG TGGTGGCGTC GGTCTCCTGC ATCTATGGCA TCGGCTCACC GGACGAGTAC 
CGCGAGCAGA TCGTCCCGCT GCACGTCGGC CAGCAGATCG AGCGCAACGA ACTGCTCCGG 
CGACTGGTCA ACATCTACTA CACGCGCAAC GACGTGGAAT TCAAGCCGGG CACGTTCCGC 
GTGCGGGGCG ACGTGGTGGA CATCTTCCCG GCCTACGCCG AGGAGAGCGC CTTTCGCATC 
GAGTTCTGGG GCGACGAGAT CGACCGCATC GCCCGGCTGG ATCCCACAAC GGGTGAACTG 
GGCGCCGAGG AGACGGCCAT CACGATCTAT CCGGCAAAGA TTTTCGTCAC GCCGCGCGAC 
CGGCTGGAGC GGGCCATTGC TTCGATCGAG GAAGAGTTGC GCTGGCGGCT GGCCGTACTC 
CGGGCCGAGG GCAAACTGCT CGAAGCCCAG CGTCTGGAGC AGCGCACGCG CTTCGACATC 
GAAATGCTCC GCGAAGTCGG CTACTGCTCG GGCATCGAAA ACTACAGCCG CCATCTGTCG 
GGACGGGCGC CCGGCGAGCG GCCCTACTGC CTGTTCGATT ACTTTCCGGA CGACTACCTG 
CTCATCATCG ACGAAAGCCA TGTCACGATC CCCCAGGTGC GGGCCATGTA CAACGGCGAC 
CGGGCCCGCA AGCTGACGCT GGTCGAGCAC GGTTTCCGAC TGCCCTCGGC GCTCGACAAC 
CGGCCGCTGA CGTTCGAGGA GTTCGAGGCG CTGCACCATC AGGTGATCTT CGTGAGCGCC 
ACGCCCGGCG ATTATGAGCT GGAAAAGAGC GGCGGCGTGG TGGTCGAGCA GATCATCCGA 
CCCACGGGCA TTCCCGACCC CGAGGTCGAG GTGCGGCCCA CCGAAGGCCA GATCGACGAC 
CTGCTCGAAG AAATCCGTCA GGTGGTGGCG CGCGGCGAGC GGGCGCTGGT GACCACGCTC 
ACCAAACGCA TGGCCGAGGA CCTGGCCGAG TATCTGGACC GCTTCGGCGT GCGCGTCCGC 
TACCTGCACT CCGAGATCGA CGCGCTCGAA CGCGTGGATC TGCTGCGTGG CCTGCGGCTG 
GGTGAGTTCG ACGTGCTCGT GGGCGTCAAC CTGCTGCGCG AAGGGCTCGA CCTGCCCGAG 
GTGTCGCTGG TGGCCATCCT CGACGCCGAC AAGGAGGGCT TCCTGCGCTC GGAACGCTCG 
CTGATCCAGA CGGCGGGGCG GGCGGCCCGC AACGCGAACG GCAAGATTCT GCTCTACGCC 
GACCGGATCA CCGAGGCCAT GCAGCGCATG ATCGACGAGA CGAATCGCCG CCGCGCCATT 
CAGCTCGAAT ACAACCGCAA GCACGGCATC ACGCCGCGCA CCGTGTACAA GTCGCGCGAG 
GAGATTCTGA AAAGCACGAT CGTGGCCGAA GAGAAGTACC GGCCGCTGGT CGATTCGCCC 
CGCTACGAGG AGCCCGAGGT GCCGCCGATC GTGGCCGATC CGGTCTTGAA GGAACTGACG 
CCCGAGCAGA AACGGGAGCT GATCGAACAG CTCCGGCGCG AAATGCTCGA AGCCGCCGAA 
AACCTGGAGT TCGAGCGGGC GGCCGAGCTG CGCGACACGA TCCTGGCGCT CGAGCGCGAG 
CTGGACGCGC ACGAGGCCGG GTAG 

 

Protein sequence

MEGAVENRKF ELVAPFEPTG DQPRAIAELT EGILRGDKYQ TLLGATGTGK TFVLSHVIQN 
VQRPTLVMSP NKTLAAQLYG EFKQFFPNNA VEFFISYYDY YQPEAYIPAT DTYIEKDLAI 
NERIDRLRLR ATSALVSGRR DVIVVASVSC IYGIGSPDEY REQIVPLHVG QQIERNELLR 
RLVNIYYTRN DVEFKPGTFR VRGDVVDIFP AYAEESAFRI EFWGDEIDRI ARLDPTTGEL 
GAEETAITIY PAKIFVTPRD RLERAIASIE EELRWRLAVL RAEGKLLEAQ RLEQRTRFDI 
EMLREVGYCS GIENYSRHLS GRAPGERPYC LFDYFPDDYL LIIDESHVTI PQVRAMYNGD 
RARKLTLVEH GFRLPSALDN RPLTFEEFEA LHHQVIFVSA TPGDYELEKS GGVVVEQIIR 
PTGIPDPEVE VRPTEGQIDD LLEEIRQVVA RGERALVTTL TKRMAEDLAE YLDRFGVRVR 
YLHSEIDALE RVDLLRGLRL GEFDVLVGVN LLREGLDLPE VSLVAILDAD KEGFLRSERS 
LIQTAGRAAR NANGKILLYA DRITEAMQRM IDETNRRRAI QLEYNRKHGI TPRTVYKSRE 
EILKSTIVAE EKYRPLVDSP RYEEPEVPPI VADPVLKELT PEQKRELIEQ LRREMLEAAE 
NLEFERAAEL RDTILALERE LDAHEAG