Gene Rmar_0015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0015 
Symbol 
ID8566636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp12925 
End bp15762 
Gene Length2838 bp 
Protein Length945 aa 
Translation table11 
GC content62% 
IMG OID 
Productreplicative DNA helicase 
Protein accessionYP_003289312 
Protein GI268315593 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.756014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGAGT TTGAGGAGCG TCCCCGGTTG AGCATTGGCG AAGAGGAAGC GCCGCCCTAC 
CCGCTGGAGA AGCTGACCGG CGGGCGACGC CGCACGCGTG CCCAGATTCA TGCGCTGCAC
CAGCAGGCCG GACGCGTGCC GCCCCAGGCC GTCGAGCTGG AGCAGGCCGT GCTCGGCGCC
ATGCTCATCG AGCCGGAGGC GATCCCCCGG GCACTGGAGA TCCTGACGCC CGAGGCCTTC
TACGACGGCC GCCACCAGCG CATCTTTCGG GCCATCGTCC GGCTGTTCGA GCAGAACCGG
GGCGTCGATC TGCTGACGGT TACCGAGGAG CTGCGGCGCA CGGGCGAGCT GGAGCAGGCC
GGCGACACGA TCTACCTGAG CGAACTGACC ACCCGCGTGG CCTCGGCGGC CAACGTCGAA
TACCACGCCC GGATCATCGC CGAGAAGGCG CTCCTGCGCC GCATGATCGA GGTGATGACG
CTCCTGGTGG GCCGTGCCTA CGATCCGGCC GCCGACGCCT TCGAGCTGCT CGACGAGGTG
GAGGCCGAGA TCTTCCGGCT CTCGGACGTG CACCTGCGCA AGGCGGCCCG TTCGATGAAC
GAGGTCGTCA AAGAGACGCT GGAGCGGCTG GAAGCCATTC ACGGCCGGCC GGGTGGCATC
ACGGGCGTTC CCAGCGGCTT CCACCAGCTC GATGCGCTGA CGGGCGGCTG GCAACGGGGC
GATCTGATCA TCATCGCGGC CCGTCCGTCG ATGGGCAAGA CCGCCTTCGC GCTGAGTTGT
GCGCGCAACG CCGCGCTGCA CCCGCACTAC GGCACGGGCG TGGCCATCTT CTCCCTGGAG
ATGGGCGCCG AACAGCTGGC CCAGCGCCTG CTGACGGCCG AGGCCCGCGT CGATGCCCAG
GCGGCCCGCA CCGGACGGCT GCGCGACGAG GACTGGCGTA AGCTGGCCCG CGCGGCCGGC
CGCCTCTCGG ACGCGCCGAT CTTCATCGAC GACACCCCCT CGCTCGGCGT GCTCGAACTC
CGCGCCAAAT GCCGCCGCCT GAAGGCCGAG CACGACATCG GGCTGGTGAT CGTCGACTAC
CTGCAGCTCA TGCAGGCTTC CCACATGCCG CGCAACGCCA ATCGCGAGCA GGAAATCGCC
CAGATCTCCC GCTCGCTCAA GGCACTGGCC AAGGAGCTGA ACGTGCCGGT TGTGGCCCTC
TCCCAGCTCA GCCGTGCCGT CGAAACCCGC GGCGGCGACA AACGCCCCCA GCTCTCCGAT
CTACGCGAAA GCGGATGCCT TGCCGGAGAC ACCCTGATTA CGTTGGCCGA TGGACGACGT
GTACCGATTC GCGAGCTGGT GAGCCAGCAG AATTTCTCGG TGTGGGCCCT GAATCCTCAG
ACGTATCGTC TGGAGCGCGC CCGGGTCAGC AGGGCATTCT GCACCGGGAT CAAACCGGTC
TATCGTCTGA CCACCCGGCT GGGCCGAAGC ATCCGGGCCA CGGCCAATCA CCGATTTCTG
ACTCCTCAGG GTTGGAAACG CGTGGACGAA CTTCAGCCAG GCGACTACCT GGCGCTACCC
CGCCGTATTC CCACAGCTTC TACCCCAACC CTCACCGAAG CAGAGCTGGC GCTACTGGGC
CACCTCATCG GCGATGGCTG CACGCTTCCG CACCATGTAA TTCAATACAC AAGCCGAGAC
GCGGATCTGG CAACACTGGT TGCACACCTT GCCACCAAGG TTTTTGGATC AAAAGTGACA
CCCCAGATCC GAAAAGAACT TCGCTGGTAT CAGGTATACC TTCGAGCAGC CCGGCCTCTT
GCTCCAGGAA AACGAAATCC TATCAGCGAC TGGCTGAGGG ATCTCGGAAT TTTTGGCCTT
CGCTCCTACG AAAAGAAAGT ACCGGCTCTA CTTTTCTGTC AAACATCTGA AGCCATAGCC
ACCTTTCTCC GCCACTTATG GGCAACTGAC GGCTGCATTC AAATGCGTCG GGGTAAAAAG
CCCTATCCCG CCGTGTACTA TGCAACCAGC AGCTATCAGC TCGCCCGAGA TGTACAGTCG
CTGCTTCTGC GCCTTGGCAT TAATGCCCGC CTCAAAACAG TTGCCCAGGG AGAAAAAGGG
CGAGTTCAGT ATCATGTCAA AGTGAGCGGC CGGGAAGATC TTTTGCGCTT TGTAGAAAAA
ATCGGTGCAG TAGGAGCTCG TCAGCGGGCT GCTCTTGCAT CTGTATATGA TTATCTGTCT
GTGAGAACAG GGAATCCCAA TCGGGACATT ATTCCCGTTG CACTCTGGTA TGAACTGGTG
CGTGAAGCCA TGTATCAGCG CGGCATCAGC CACCGTCAGT TACACGCCAA CCTGGGAATG
GCTTACGGTG GAATGACTCT TTTCCGTCAG AACCTGAGTC GCGCACGCGC CCTGCGTCTT
GCCGAAGCTG CTGCCTGTCC AGAACTTCGC CAGCTGGCTC AGAGCGATGT CTACTGGGAT
CCTATCGTTT CGATCGAGCC GGACGGCGTC GAGGAGGTAT TCGATCTGAC CGTTCCCGGA
CCGCACAACT TCGTGGCCAA CGACATTATC GCTCATAACA GCATCGAGCA GGATGCCGAC
GTCGTGCTGT TTATCTACCG ACCCGAGCGC TACGGCATTA CGGTGGACGA AAACGGCAAC
CCTACCGAGG GTATCGCCGA GATCATTATC GGCAAGCAGC GCAACGGTCC GACCGGCACC
GTGCGGCTGG CTTTCATCAA CCAGTATGCC CGCTTCGAGA ACCTGACGAT GTACCAGCCG
GAGCCCGGAA CGCCCCTGCC CGAGACGCCG GATGAGACCA TCCTGCCTTC CGGGCCTCCC
GACGAAGCGC CTTTCTGA
 
Protein sequence
MAEFEERPRL SIGEEEAPPY PLEKLTGGRR RTRAQIHALH QQAGRVPPQA VELEQAVLGA 
MLIEPEAIPR ALEILTPEAF YDGRHQRIFR AIVRLFEQNR GVDLLTVTEE LRRTGELEQA
GDTIYLSELT TRVASAANVE YHARIIAEKA LLRRMIEVMT LLVGRAYDPA ADAFELLDEV
EAEIFRLSDV HLRKAARSMN EVVKETLERL EAIHGRPGGI TGVPSGFHQL DALTGGWQRG
DLIIIAARPS MGKTAFALSC ARNAALHPHY GTGVAIFSLE MGAEQLAQRL LTAEARVDAQ
AARTGRLRDE DWRKLARAAG RLSDAPIFID DTPSLGVLEL RAKCRRLKAE HDIGLVIVDY
LQLMQASHMP RNANREQEIA QISRSLKALA KELNVPVVAL SQLSRAVETR GGDKRPQLSD
LRESGCLAGD TLITLADGRR VPIRELVSQQ NFSVWALNPQ TYRLERARVS RAFCTGIKPV
YRLTTRLGRS IRATANHRFL TPQGWKRVDE LQPGDYLALP RRIPTASTPT LTEAELALLG
HLIGDGCTLP HHVIQYTSRD ADLATLVAHL ATKVFGSKVT PQIRKELRWY QVYLRAARPL
APGKRNPISD WLRDLGIFGL RSYEKKVPAL LFCQTSEAIA TFLRHLWATD GCIQMRRGKK
PYPAVYYATS SYQLARDVQS LLLRLGINAR LKTVAQGEKG RVQYHVKVSG REDLLRFVEK
IGAVGARQRA ALASVYDYLS VRTGNPNRDI IPVALWYELV REAMYQRGIS HRQLHANLGM
AYGGMTLFRQ NLSRARALRL AEAAACPELR QLAQSDVYWD PIVSIEPDGV EEVFDLTVPG
PHNFVANDII AHNSIEQDAD VVLFIYRPER YGITVDENGN PTEGIAEIII GKQRNGPTGT
VRLAFINQYA RFENLTMYQP EPGTPLPETP DETILPSGPP DEAPF