| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001584 |
|---|
| Symbol | |
|---|
| ID | 8559897 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | - |
|---|
| Start bp | 1797822 |
|---|
| End bp | 1798805 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 646409252 |
|---|
| Product | branched-chain alpha-keto acid dehydrogenase E1 component beta subunit |
|---|
| Protein accession | YP_003288730 |
|---|
| Protein GI | 262396877 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAGC TAACGTTAGT TGAAGCAGTA AACCTCGCTC TGCACCACGA AATGCAACAA
GACCAAAATG TTGTCGTGTT AGGTGAGGAC GTAGGTGATA ATGGTGGCGT ATTCCGTGCC
ACCGTAGGGC TCAAACAAGA GTTTGGTCTC AAACGAGTGA TCGATACGCC ACTCGCTGAA
GCGTTAATCG GCGGTGTTGC GGTCGGTATG GCAACGCAAG GATTACGACC TGTCGCCGAA
TTTCAATTTC AAGGTTTCGT TTTTCCTGCA ATGGAGCACT TAATGTGCCA CGCGGCACGC
ATGCGTAACC GAACTCGCGG TCGCCTCACT TGCCCTGCGG TTTTTCGTGC GCCATTTGGT
GGCGGTATTC ACGCTCCAGA GCACCACTCA GAAAGTGTAG AGGCGCTATT TGCGCACACT
GCTGGCTTTA AAGTAGTGAT TCCTTCTTCA CCTCAACGCG CATACGGCCT GCTTCTCGCC
GCGATTCGAA GTAATGATCC TGTCATGTTC TTCGAACCGA AACGCATTTA TCGAACCGTA
AAATCTGAAG TCGTTGATAA TGGCGAAGCA CTTCCACTCG ACACCTGCTT CACCTTACGT
AAGGGGCGAG ATATCACGCT TGTTACTTGG GGCGCATGCG TCGTAGAGTC ACTTCAAGCC
GCACAGACCT TATCTAGTCA AGGAATTGAA GTCGAGGTGA TTGATTTGGC GAGCATTAAG
CCAATTGATA CCGCAACGAT TTTCAGCTCA CTAGAAAAAA CCGGACGTTT ACTCGTTGTT
CATGAAGCGA GTAAAACTTG TGGTGTGGGC TCTGAGCTTT TAGCTCGAAC AGCCGAACAC
GCCATGTGCT TACTAAAAGC CCCACCTAAA CGAGTAACTG GAATGGATAC CATTATGCCT
TATTACCGTA ACGAAGATTA TTTCATGGTT CAGGAAGAAG ACATTGTGAC CGCAGCGCGC
GAACTCGTGG AGGATTGGAA ATGA
|
|---|
| Protein sequence | MAELTLVEAV NLALHHEMQQ DQNVVVLGED VGDNGGVFRA TVGLKQEFGL KRVIDTPLAE
ALIGGVAVGM ATQGLRPVAE FQFQGFVFPA MEHLMCHAAR MRNRTRGRLT CPAVFRAPFG
GGIHAPEHHS ESVEALFAHT AGFKVVIPSS PQRAYGLLLA AIRSNDPVMF FEPKRIYRTV
KSEVVDNGEA LPLDTCFTLR KGRDITLVTW GACVVESLQA AQTLSSQGIE VEVIDLASIK
PIDTATIFSS LEKTGRLLVV HEASKTCGVG SELLARTAEH AMCLLKAPPK RVTGMDTIMP
YYRNEDYFMV QEEDIVTAAR ELVEDWK
|
|---|
| |