| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001579 |
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| Symbol | |
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| ID | 8559892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 1783770 |
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| End bp | 1785083 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646409247 |
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| Product | agglutination protein |
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| Protein accession | YP_003288725 |
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| Protein GI | 262396872 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.582339 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGCTAA GTAATATTAG TATCGCGTGT TTTGGTTTGC TAATACCACT GGTTTCTAGC
GCACAAACTT TAGAACAAGC AATAGCGACA ACATTTGCAA CGAACCCTGA TATCAAAAGT
GCGTTTAACG AGTATATGAG TAGTCGTTAT ATTATCGATA AATCACGTGG AGCATATAAA
CCTAGTCTCG ATATTGACGC GGGTATCGGT TACGAGAGCA TTCACCCTTC CGACTCTACT
GGTAAGAGTG ATACCGAGAT GACCCGTAAA GATATGGCAA TTACTCTTAC CCAGTTGATC
TGGGATGGTT CAAAAACCCT ATATGACATT GATCGTACCT CTGCAGATGC AGAGTCTGTG
CGTTATCAGT TACTTGCAGA TGCCCAAAAT GTTGCGTTAG AAGTCATTAA AGCTTATTTG
GATGTAGTAA AAACACAAAA GCTGACTGCG CTTTCCACTA GCAACCTAAA CACACATAAG
CGAATTTATA CTGATATTAA AAAGCGTACA GAGTCAGGAA TTGGCTCAGT TGCCGACCTT
AACCAGGTTA AAGCTCGTTT AGCAAAAGCT CAAAGTAATG TTTTAGCTGC ACAAAATAAC
CATAAAGACG CTCAAACAGC ATTCTTTCGC TTAGTTGGTG AAGCACCAAC TAACCTTATT
TTTCCGCACG CAGACCAAAA CTTTATCCCC AATTCTCTAG ACGAGGCCCA ATCGCAGGCT
TTTGACAATC ATCCTGTCAT AAAAATAGCA CTCGCAGATG TCGATTCTGC CAGGTTCCAA
TATAAACAAG CGGATGCAAA CTATTTCCCA GTCATCTCAT TTGAAGCGAA ACAAAGCTGG
AACGATGATG TAGGAGGAGT AAATGGTCTC AACTCTGAAA CACAAGCAAT GCTCCGTGTC
CGATACAACC TTTACAACGG TGGCCGAGAC TCTGCAAACA GTGACAGTAT GGCCTACCAA
CTCAATAAAG CGAAAGACCT CAGAGAGCGA GCATACCGAA GTGTGGAGCA AGAGCTCCGC
CTTTCTTGGA GCGCTCTTGA GCTGACTAAA CAACAAAAGT CTTTTTTAAT ACAACACGTT
GATTCCATGT CAAACACCGT TATTGCATAC CAAAAACAAT ATCGTATTGG AAAGCGCACC
CTACTTGATC TGCTGAACAC TGAAAACGAG TTGTTTGAAT CACGCAAAAA CTACTTAGAA
ACACAATTTG CGCAGCAATA CGCACAATAT CGAACCCTGA CTTCAACCGG GCAGCTTTTA
GACGCATTGC GCGTCGACAT ACCGGAAGCG TGGACTCAAT CGGTGGAGTA CTAA
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| Protein sequence | MKLSNISIAC FGLLIPLVSS AQTLEQAIAT TFATNPDIKS AFNEYMSSRY IIDKSRGAYK
PSLDIDAGIG YESIHPSDST GKSDTEMTRK DMAITLTQLI WDGSKTLYDI DRTSADAESV
RYQLLADAQN VALEVIKAYL DVVKTQKLTA LSTSNLNTHK RIYTDIKKRT ESGIGSVADL
NQVKARLAKA QSNVLAAQNN HKDAQTAFFR LVGEAPTNLI FPHADQNFIP NSLDEAQSQA
FDNHPVIKIA LADVDSARFQ YKQADANYFP VISFEAKQSW NDDVGGVNGL NSETQAMLRV
RYNLYNGGRD SANSDSMAYQ LNKAKDLRER AYRSVEQELR LSWSALELTK QQKSFLIQHV
DSMSNTVIAY QKQYRIGKRT LLDLLNTENE LFESRKNYLE TQFAQQYAQY RTLTSTGQLL
DALRVDIPEA WTQSVEY
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