| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001576 |
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| Symbol | |
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| ID | 8559889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 1780515 |
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| End bp | 1781087 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646409244 |
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| Product | protocatechuate 3,4-dioxygenase beta chain |
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| Protein accession | YP_003288722 |
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| Protein GI | 262396869 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACGTC GACACTTCTT AGCTTTATGG TCGCTAATAT TTGCGCCTTC GCTAAAATCC
GCTAGCCCAA TGAAGCCGAC ACCGCCTCAA ACGGAAGGGC CATTTTATCC CGTGGTTCCA
GTGCCACTTC GTCAAAATTT GATTTTGCAG TCGAAAGGTC TTATTGGTGA GCCCATTTTT
CTTCAGGGTA AGGTAATGGA TACAGCAGGA AACCCATTGT CTGAAATGAA AATAGAAATA
TGGCAATGTG ATGGACAAGG CATCTATGAT CACCCGAATC AACCTAACAA TAATAAGTTT
GATCCTCACT TTGCAGGCTT TGGTGCAGTT TTAACTGGCG AAGATGGGAA TTACCTTTTT
CAAACGTTAT TTCCGGTTCC ATATAGCTCT CGACCTCCCC ACATCCACGT AAAATTGTGG
CGTGGAGAGA AAGAGCTGTT AACGACTCAG CTTTATTTGA AAGGGCGAAC TGGTAACGAG
TGGTGGGGCG GAAAAGCCCG TGATTATTTG CAGTTTGAGC CTGTCAACAT TGATGGTCGA
GTCGTCGGTG AGTTCAATTT TGTGCTCGCT TAG
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| Protein sequence | MERRHFLALW SLIFAPSLKS ASPMKPTPPQ TEGPFYPVVP VPLRQNLILQ SKGLIGEPIF
LQGKVMDTAG NPLSEMKIEI WQCDGQGIYD HPNQPNNNKF DPHFAGFGAV LTGEDGNYLF
QTLFPVPYSS RPPHIHVKLW RGEKELLTTQ LYLKGRTGNE WWGGKARDYL QFEPVNIDGR
VVGEFNFVLA
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