| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001561 |
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| Symbol | |
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| ID | 8559874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 1764742 |
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| End bp | 1765632 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646409230 |
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| Product | transcriptional regulator LysR family |
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| Protein accession | YP_003288708 |
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| Protein GI | 262396855 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTATTA AGCTTCAACA ATTAATGCAT TTTGTGATGG TAGTCGAGGA AGGGGGCTTT
CGAGCCGCTT CACATCGTGC AAATCGATCT CAGGCTGCGC TCTCCACGTC GATAAAAGAG
CTAGAGAAAA TGCTAGGACA AACGCTGTTT GAGCCCGGCA ACAAAACCAA ATTAACGCCT
TTTGGTGAGA TTTGTTTGCC CAAGGTGGTT CAGTTTCTCA ATATCTACAG TGCGCTGGAC
AACGATCTCA AAGCTGCCGC GGCCGGACAG CAAGGGAGAG TGCGAATTGC GAGCGTTCCT
TCTGTTGCAG CGAAACTCAT CCCGAGCGTG TTGGGTGCCT TTTGCGAGCA GTATCCAAAT
GTAGAAGTAA GCTTAATCGA TGATAACGCG GCGGGCGTCG AGGCTCGCCT ACTCTCCGGT
GAGGTTGACT TAGCGCTCGG TAACCCCTCT CACCTCGATG AGGGCGGCAT TGACTTTACG
CCGCTGTTGT CCGACCCCAT TGGCGTGGTG TGTTTAAAAG ATAACCCTAT TGCCGATCAA
ACAGAGGGAA TCGAGTGGCA AACTTTGCTC GAACAACCTT TCATTCGTAA CGGCACCTGT
ACGCTTCTCG ATCCAACCCC AGCCAGAGCA TTGAGTGAGC AAGCACTCTA TTCGGTCGAG
AATATCACTT CGCTGTTTTC TGTCTTAGAA CTTGGGATTG GTGTCACGAC CCTACCGAAG
CTTGCTTTCC CAACCAATGA AACACGCTTG GTTTGGATCC CGCTTATCGA TCCACCGCTT
GAAAGGCAAA TTGGTATCTT TACGTTGACC GACCGCACGA TCTCGCCTCA AGCTAAAGCG
TTTCATGATT TGTGTGTACG TTATCTAAAC TATCAAGATG AAGAAACGTA G
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| Protein sequence | MSIKLQQLMH FVMVVEEGGF RAASHRANRS QAALSTSIKE LEKMLGQTLF EPGNKTKLTP
FGEICLPKVV QFLNIYSALD NDLKAAAAGQ QGRVRIASVP SVAAKLIPSV LGAFCEQYPN
VEVSLIDDNA AGVEARLLSG EVDLALGNPS HLDEGGIDFT PLLSDPIGVV CLKDNPIADQ
TEGIEWQTLL EQPFIRNGTC TLLDPTPARA LSEQALYSVE NITSLFSVLE LGIGVTTLPK
LAFPTNETRL VWIPLIDPPL ERQIGIFTLT DRTISPQAKA FHDLCVRYLN YQDEET
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