Gene VEA_001548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001548 
Symbol 
ID8559861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1751649 
End bp1752434 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content48% 
IMG OID646409218 
Product3-hydroxyisobutyryl-CoA hydrolase 
Protein accessionYP_003288696 
Protein GI262396843 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCATTAA CCCAAGAAGC CATTCAACAT ACGATCGCTA ATCACGTTGC GGTGGTGACG 
ATGAACAACC CGCCAGCCAA TACGTGGACA GCAGAGAGCC TCAAGGCACT GAAGTCGCTG
ATACTCACAC TTAACGATGA TAAGCAGGTC TACGCACTGG TTTTAACCGG CAGTGGAGAA
AAGTTTTTCT CTGCTGGTGC GGATCTCAAG CTATTTTCTG ATGGTGACAA AGCGGTTGCG
TTAGACATGG CGCGATGCTT TGGTGAAGCG TTTGAAACAC TCTCGGAATT CCGTGGTGTT
TCCATTGCCG CCATTAATGG TTACGCCATG GGCGGAGGTT TAGAAGTAGC ATTAGCTTGT
GATATTCGAG TAGTTGAAGA GCAAGCGGTA CTTGCTTTAC CTGAAGCCAA AGTCGGACTT
TTGCCCTGCG CTGGCGGTAC CCAAAACCTC ACAGCGTTAG TAGGAGAAGG CTGGGCAAAG
CGCATCATTT TATGTGGAGA ACAAGTTAGC GCTGACAAAG CAAAAGAACT AGGCTTGGCT
GAGGAGTTGG TTCCCAAAGG CGAAGCGTTA AGTAAAGCGT TGGAGCTTGC TGAATCTGTT
GCGAACCAGT CACCATCTTC TGTCGCCGCA TGTAAGGCGC TCATTCAAAA TATGCGCTCT
GCGCCACTTA AGCACGGCTT AATGAAAGAG CGAGAGTTGT TTCTGAATCT TTTTGATACG
GAAGATCAAG TTGAGGGTGT TCGCGCCTTT TTAGAAAAAC GCCCACCGCA ATGGAAAAAT
CGATAG
 
Protein sequence
MPLTQEAIQH TIANHVAVVT MNNPPANTWT AESLKALKSL ILTLNDDKQV YALVLTGSGE 
KFFSAGADLK LFSDGDKAVA LDMARCFGEA FETLSEFRGV SIAAINGYAM GGGLEVALAC
DIRVVEEQAV LALPEAKVGL LPCAGGTQNL TALVGEGWAK RIILCGEQVS ADKAKELGLA
EELVPKGEAL SKALELAESV ANQSPSSVAA CKALIQNMRS APLKHGLMKE RELFLNLFDT
EDQVEGVRAF LEKRPPQWKN R