Gene VEA_001544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001544 
Symbol 
ID8559857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1747056 
End bp1747430 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content42% 
IMG OID646409214 
Productpredicted transcriptional regulator LiuR of leucine degradation pathway MerR family 
Protein accessionYP_003288692 
Protein GI262396839 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAT ACAAGATCAG TGACCTCGCC AAGGAGTTTG ATATTACCAC TCGCAGTATC 
CGGTTTTATG AGGACGTAGG TCTGATTGAA CCAGAGCGAA AAGGCAACAT GCGCGTTTAT
CAACGCAGAG ATAAAATTCG TCTCAAACTG ATTTTAAGAG GGAAACGGCT CGGTTTTTCA
CTGGCAGAAA TTCGTGAACT TTTCGAGCTC TATGACATGC AACAAACCGA AGGACAGTTA
TTGAAAATGC TCAATATCAT TGAAGAGAAA CAAGCCGTCC TACAACAGCA ACTCAATGAC
ATCAGCGTCG TAATGGCAGA GTTGAATGCC GCTAAAGAAC GCTGTATTCA AACACTCAAA
AGCAAAGAGA CATAA
 
Protein sequence
MEKYKISDLA KEFDITTRSI RFYEDVGLIE PERKGNMRVY QRRDKIRLKL ILRGKRLGFS 
LAEIRELFEL YDMQQTEGQL LKMLNIIEEK QAVLQQQLND ISVVMAELNA AKERCIQTLK
SKET