| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001540 |
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| Symbol | |
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| ID | 8559853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 1742413 |
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| End bp | 1743321 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646409210 |
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| Product | hydroxymethylglutaryl-CoA lyase |
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| Protein accession | YP_003288688 |
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| Protein GI | 262396835 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCCTT CCAAAGTAAA TATTGTCGAA GTAGGTCCAC GAGATGGGTT GCAAAATGAA
TCTCCTGTTG CGACCCAGAC TAAAATCCGG TTGATCAACT TACTCTCTGA TACTGGGCTA
ACGCATATTG AGGCGGGCTC TTTTGTTTCG CCCAAATGGG TGCCACAAAT GGCGGACTCA
ACAGAGGTCA TGAAAGCAAT AACAAGGCGA AATCATGTTA CTTATTCTGC CCTGACACCA
AATCTAAAAG GCTTCGAACA AGCCTTGGAG GCTGGTGCCA ATCAGGTCGC AATTTTCACT
TCATCATCAG AAGGATTCTG CCAACACAAT ATCAATTGCT CGATTGCAGA AAGTTTAACT
CGCTTCGAGC CTGTAATGCG ATTAGCCACC AAACACAGCA TCCCTGTTCG AGGTTATCTA
TCCTGCGTTG CAGATTGCCC TTACGACGGT CCAACAGCCC CTAAACAGGT GGCGAGCGTG
ACCAAATCGC TCATCGATTT AGGGTGCTAT GAAGTATCCC TAGGCGATAC AATCGGCACA
GGCACGCCAA ATCGAATTGC TGCTATGCTG GAAGCCGTCA TGTTGGTTGC ACCTCTTCCC
CAGCTTGCTG TCCATTTCCA CGACACATGG GGACAAGCTC TCACCAACAT TTATCAGGCA
CTGAGTATGG GCATCAACAC CATCGACAGT AGTGTAGCTG GGCTGGGTGG ATGCCCATAC
GCTCATGGCG CATCAGGGAA TGTCGCAACG GAGGATGTAC TGTATTTATG CCAAGGGTTA
GGAATAGAGA CGGGGATCGA CTTAGAGCTA CTGGCTAAAG CTGGCTGGAT GATCAGCGAA
GAGCTGGGTC GGCAGCCTAC ATCAAAAGTG TCATTAGCAT TGCGTAACCG CGTATTATCA
CTTTCGTAG
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| Protein sequence | MLPSKVNIVE VGPRDGLQNE SPVATQTKIR LINLLSDTGL THIEAGSFVS PKWVPQMADS
TEVMKAITRR NHVTYSALTP NLKGFEQALE AGANQVAIFT SSSEGFCQHN INCSIAESLT
RFEPVMRLAT KHSIPVRGYL SCVADCPYDG PTAPKQVASV TKSLIDLGCY EVSLGDTIGT
GTPNRIAAML EAVMLVAPLP QLAVHFHDTW GQALTNIYQA LSMGINTIDS SVAGLGGCPY
AHGASGNVAT EDVLYLCQGL GIETGIDLEL LAKAGWMISE ELGRQPTSKV SLALRNRVLS
LS
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